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Pou5f1-rs8 Pseudogene Detail
Summary
  • Symbol
    Pou5f1-rs8
  • Name
    POU domain, class 5, transcription factor 1, related sequence 8
  • Synonyms
    Gm6539, Otf3h, Otf3-rs8
Location &
Maps
more
  • Sequence Map
    ChrX:51967669-51969066 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 29.26 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    19
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_101886
 pseudogene ChrX:51967608-51969272 (+)
129S1/SvImJ ENSMUSG00200037884
 pseudogene ChrX:35850872-35852269 (+)
A/J ENSMUSG00195017207
 pseudogene ChrX:38627695-38629092 (+)
AKR/J ENSMUSG00220038670
 pseudogene ChrX:35505748-35507145 (+)
BALB/cJ ENSMUSG00180034906
 pseudogene ChrX:36347831-36349228 (+)
C3H/HeJ ENSMUSG00175042577
 pseudogene ChrX:39382450-39383847 (+)
C57BL/6NJ ENSMUSG00215048556
 pseudogene ChrX:36355536-36356933 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012634
 pseudogene ChrX:45413749-45415118 (+)
CAST/EiJ ENSTCUG00005038809
 pseudogene ChrX:38329452-38330849 (+)
CBA/J ENSMUSG00210043529
 pseudogene ChrX:36605909-36607306 (+)
DBA/2J ENSMUSG00185035134
 pseudogene ChrX:47309918-47311315 (+)
FVB/NJ ENSMUSG00205035346
 pseudogene ChrX:34946118-34947515 (+)
JF1/MsJ ENSUMUG00000029371
 pseudogene ChrX:66344385-66345782 (+)
LP/J ENSMUSG00230029997
 pseudogene ChrX:53854308-53855705 (+)
NOD/ShiLtJ ENSMUSG00190036839
 pseudogene ChrX:35714262-35715659 (+)
NZO/HlLtJ ENSMUSG00225043706
 pseudogene ChrX:59029023-59030420 (+)
PWK/PhJ ENSLUMG00010042299
 pseudogene ChrX:36030539-36031936 (+)
SPRET/EiJ ENSMSPG00010026681
 pseudogene ChrX:37735445-37736815 (+)
WSB/EiJ ENSIUOG00005048441
 pseudogene ChrX:36856931-36858328 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083683 Ensembl Gene Model | MGI Sequence Detail 1398 C57BL/6J ±  kb
transcript ENSMUST00000119157 Ensembl | MGI Sequence Detail 1064 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-13078, MGD-MRK-18712, MGD-MRK-19417, MGI:3645062
References
more
  • Summaries
    All 9
  • Earliest
    J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
  • Latest
    J:224363 Scarola M, et al., Epigenetic silencing of Oct4 by a complex containing SUV39H1 and Oct4 pseudogene lncRNA. Nat Commun. 2015;6:7631
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory