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pU1.3 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pU1.3
  • Sequence Type
    genomic
  • ID
    MGI:17181
  • Region Covered
    encodes Rnu1b1; intergenic sequence; Rnu1b2 and flanking sequence
  • Parent Clone
    pMMU1.10
  • Child Clones
    pU1.1, pU1.2, U1-T13
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI
  • Insert Size
    6.9kb
Source
  • Species
    mouse, laboratory
  • Strain
    BALB/c
  • Sex
    Male
  • Tissue
    sperm
Genes
Rnu1-ps1 U1 small nuclear RNA pseudogene 1
Rnu1-ps2 U1 small nuclear RNA pseudogene 2
Rnu1a2 U1a2 small nuclear RNA
Rnu1b1 U1b1 small nuclear RNA
Rnu1b2 U1b2 small nuclear RNA
Sequences
K03128 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
M32270 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
Polymorphisms
J:9073 Blatt C, et al., Somat Cell Mol Genet. 1988 Mar;14(2):133-42
Notes: Fragments are identified by authors as U1-7 (Rnu1-ps1), U1-8 (Rnu-ps2), and U1-9/U1-10 (Rnu1a-2). Fragments U1-1 through U1-6 belong to the Rnu1b cluster (Rnu1b-1 data here).
Endonuclease Gene Allele Fragments Strains
BglII Rnu1a2 b not given A/J, C57BL/6J
d not given DBA/2J
EcoRI Rnu1-ps1 b not given A/J, C57BL/6J
d not given DBA/2J
EcoRI Rnu1-ps2 b not given C57BL/6J
d not given DBA/2J
HindIII Rnu1a2 b not given C57BL/6J
d not given DBA/2J
HindIII Rnu1b1 a not given A/J
b not given C57BL/6J, DBA/2J
References
J:7196 Marzluff WF, et al., Isolation and characterization of two linked mouse U1b small nuclear RNA genes. Nucleic Acids Res. 1983 Sep 24;11(18):6255-70
J:9073 Blatt C, et al., Mapping and gene order of U1 small nuclear RNA, endogenous viral env sequence, amylase, and alcohol dehydrogenase-3 on mouse chromosome 3. Somat Cell Mol Genet. 1988 Mar;14(2):133-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/21/2024
MGI 6.23 		The Jackson Laboratory