Rnu1b2 Gene Detail

Summary

• Symbol
  Rnu1b2
• Name
  U1b2 small nuclear RNA
• Synonyms
  pU1.2

• Feature Type
  snRNA gene
• IDs
  MGI:104624
  NCBI Gene: 19845
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:96281337-96281501 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 41.79 cM

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_104624	snRNA gene	Chr3:96281337-96281501 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195048218	snRNA gene	Chr3:93278398-93278562 (+)
AKR/J	ENSMUSG00220043268	snRNA gene	Chr3:91659108-91659272 (+)
BALB/cJ	ENSMUSG00180040917	snRNA gene	Chr3:93260194-93260358 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215040103	snRNA gene	Chr3:93636515-93636679 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020163	snRNA gene	Chr3:93460808-93460972 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185047347	snRNA gene	Chr3:93877536-93877700 (+)
FVB/NJ	ENSMUSG00205050583	snRNA gene	Chr3:92498250-92498414 (+)
JF1/MsJ	ENSUMUG00000048206	snRNA gene	Chr3:92734443-92734607 (+)
LP/J	ENSMUSG00230046151	snRNA gene	Chr3:95813847-95814011 (+)
NOD/ShiLtJ	ENSMUSG00190046946	snRNA gene	Chr3:93975412-93975576 (+)
NZO/HlLtJ	ENSMUSG00225012342	snRNA gene	Chr3:98222308-98222472 (+)
PWK/PhJ	ENSLUMG00010032143	snRNA gene	Chr3:92721551-92721715 (+)
SPRET/EiJ	ENSMSPG00010045784	snRNA gene	Chr3:93025767-93025931 (+)
WSB/EiJ	ENSIUOG00005035153	snRNA gene	Chr3:93376515-93376679 (+)

Homology

• Gene Tree
  Rnu1b2
  

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000119030 (Evidence)
• NCBI Gene
  19845

Representative Sequences			Length	Strain/Species
genomic	19845	NCBI Gene Model | MGI Sequence Detail	165	C57BL/6J
transcript	NR_024200	RefSeq | MGI Sequence Detail	165	ZRU/MplStud

Molecular
Reagents

• All nucleic 6

  Genomic 6

Other
Accession IDs

MGD-MRK-26061

References

• Summaries
  All 8
• Earliest
  J:7196 Marzluff WF, et al., Isolation and characterization of two linked mouse U1b small nuclear RNA genes. Nucleic Acids Res. 1983 Sep 24;11(18):6255-70
• Latest
  J:8694 Moussa NM, et al., A mouse Ulb-2 gene with extensive sequence similarity to a rat Ula gene for 670 nucleotides 5' to the gene. Nucleic Acids Res. 1987 Apr 24;15(8):3622