Rnu1b1 Gene Detail

Summary

• Symbol
  Rnu1b1
• Name
  U1b1 small nuclear RNA
• Synonyms
  Rnu1b-1

• Feature Type
  snRNA gene
• IDs
  MGI:97974
  NCBI Gene: 19844
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:96267269-96267433 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 41.78 cM, cytoband D-G
• Mapping Data
  7 experiments

Strain
Comparison

• SNPs within 2kb
  14 from dbSNP Build 142
• Strain Annotations
  1
• RFLP
  3

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_97974	snRNA gene	Chr3:96267269-96267433 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rnu1b1
  

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• Ensembl
  ENSMUSG00000118876 (Evidence)
• NCBI Gene
  19844

Representative Sequences			Length	Strain/Species
genomic	19844	NCBI Gene Model | MGI Sequence Detail	165	C57BL/6J
transcript	NR_004412	RefSeq | MGI Sequence Detail	165	Not Specified

Molecular
Reagents

• All nucleic 7

  Genomic 7

  
  

  Microarray probesets 9

Other
Accession IDs

MGD-MRK-13969, MGD-MRK-13971

References

• Summaries
  All 12
• Earliest
  J:7196 Marzluff WF, et al., Isolation and characterization of two linked mouse U1b small nuclear RNA genes. Nucleic Acids Res. 1983 Sep 24;11(18):6255-70
• Latest
  J:40966 Cheng Y, et al., Control of mouse U1 snRNA gene expression during in vitro differentiation of mouse embryonic stem cells. Nucleic Acids Res. 1997 Jun 1;25(11):2197-204