RFLP Polymorphisms for Prnp

RFLP Polymorphisms

Symbol
Name
ID
Location

Prnp
prion protein
MGI:97769
Chr 2 (64.07 cM)

Reference	Probe	Endonuclease	Allele	Fragments	Strains
J:8350	pHaPrP-cDNA-1	XbaI	a	3.8kb	129P3/J, BALB/cJ, BUB/BnJ, C3H/HeSn, C57BL/6J, C57BL/10Sn, CBA/J, CE/J, DBA/2J, LP/J, LT/SvEi, NZW/LacJ, PL/J, SEA/GnJ, SEC/1ReJ, SJL/J, SM/J, ST/bJ, SWR/J, WC/ReJ, YBR/EiJ
J:8350	pHaPrP-cDNA-1	XbaI	b	5.5kb	I/LnJ, MA/MyJ, P/J, RIIIS/J
J:8918	Clone 9	BstEII	a	5.7, 3.5kb	NZW
J:8918	Clone 9	BstEII	b	15.5kb	I/Ln, IM, P/J
J:9736	5'UT probe	BamHI	a	10.9kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	12.2kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	12.2kb	RIIIS/J
			d	10.9kb	MA/MyJ
			e	10.9kb	CAST/EiJ
			f	12.2kb	MOLF/EiJ
J:9736	pHaPrP-cDNA-1	BstEII	a	5.7, 3.5kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	15.7kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.7, 3.5kb	RIIIS/J
			d	5.7, 3.5kb	MA/MyJ
			e	5.7, 3.5kb	CAST/EiJ
			f	12.2, 3.5kb	MOLF/EiJ
J:9736	pHaPrP-cDNA-1	EcoRI	a	4.2kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.4kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	4.2kb	RIIIS/J
			d	4.2kb	MA/MyJ
			e	9.7kb	CAST/EiJ
			f	4.2kb	MOLF/EiJ
J:9736	pHaPrP-cDNA-1	SacI	a	10.9kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	12.9kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	12.9kb	RIIIS/J
			d	10.9kb	MA/MyJ
			e	12.9kb	CAST/EiJ
			f	12.9kb	MOLF/EiJ
J:9736	pHaPrP-cDNA-1	TaqI	a	11.0kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.1kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	11.0kb	RIIIS/J
			d	13.5kb	MA/MyJ
			e	9.1kb	CAST/EiJ
			f	9.1kb	MOLF/EiJ
J:9736	pHaPrP-cDNA-1	XbaI	a	3.6kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	5.2kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.2kb	RIIIS/J
			d	5.2kb	MA/MyJ
			e	5.2kb	CAST/EiJ
			f	5.2kb	MOLF/EiJ
J:9736	subclone 9	BstEII	a	5.7, 3.5kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	15.7kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.7, 3.5kb	RIIIS/J
			d	5.7, 3.5kb	MA/MyJ
			e	5.7, 3.5kb	CAST/EiJ
			f	12.2, 3.5kb	MOLF/EiJ
J:9736	subclone 9	EcoRI	a	4.2kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.4kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	4.2kb	RIIIS/J
			d	4.2kb	MA/MyJ
			e	9.7kb	CAST/EiJ
			f	4.2kb	MOLF/EiJ
J:9736	subclone 9	SacI	a	10.9kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	12.9kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	12.9kb	RIIIS/J
			d	10.9kb	MA/MyJ
			e	12.9kb	CAST/EiJ
			f	12.9kb	MOLF/EiJ
J:9736	subclone 9	TaqI	a	11.0kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.1kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	11.0kb	RIIIS/J
			d	13.5kb	MA/MyJ
			e	9.1kb	CAST/EiJ
			f	9.1kb	MOLF/EiJ
J:9736	subclone 9	XbaI	a	3.6kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	5.2kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.2kb	RIIIS/J
			d	5.2kb	MA/MyJ
			e	5.2kb	CAST/EiJ
			f	5.2kb	MOLF/EiJ
J:9736	subclone 13	BstEII	a	5.7, 3.5kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	15.7kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.7, 3.5kb	RIIIS/J
			d	5.7, 3.5kb	MA/MyJ
			e	5.7, 3.5kb	CAST/EiJ
			f	12.2, 3.5kb	MOLF/EiJ
J:9736	subclone 13	EcoRI	a	4.2kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.4kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	4.2kb	RIIIS/J
			d	4.2kb	MA/MyJ
			e	9.7kb	CAST/EiJ
			f	4.2kb	MOLF/EiJ
J:9736	subclone 13	SacI	a	10.9kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	12.9kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	12.9kb	RIIIS/J
			d	10.9kb	MA/MyJ
			e	12.9kb	CAST/EiJ
			f	12.9kb	MOLF/EiJ
J:9736	subclone 13	TaqI	a	11.0kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	9.1kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	11.0kb	RIIIS/J
			d	13.5kb	MA/MyJ
			e	9.1kb	CAST/EiJ
			f	9.1kb	MOLF/EiJ
J:9736	subclone 13	XbaI	a	3.6kb	129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
			b	5.2kb	BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
			c	5.2kb	RIIIS/J
			d	5.2kb	MA/MyJ
			e	5.2kb	CAST/EiJ
			f	5.2kb	MOLF/EiJ
J:10246	pmPrP3	EcoRI	m	not given	STOCK A^w/a Oca2^p Tyr^c-ch
J:10246	pmPrP3	EcoRI	s	not given	M. spretus
J:10246	pmPrP3	SacI	m	not given	STOCK A^w/a Oca2^p Tyr^c-ch
J:10246	pmPrP3	SacI	s	not given	M. spretus
J:10246	pmPrP3	TaqI	m	not given	STOCK A^w/a Oca2^p Tyr^c-ch
J:10246	pmPrP3	TaqI	s	not given	M. spretus
J:10351	Prn-p cDNA	XbaI	a	3.8kb	NZW
J:10351	Prn-p cDNA	XbaI	b	5.5kb	I/LnJ, MA/MyJ, P/J, RIIIS/J
J:10439	pl.40	BamHI	b	9.0kb	C57BL/6J
J:10439	pl.40	BamHI	s	~21kb	M. spretus
J:14462	p1.40	XbaI	b	3.6kb	B10.UW
J:14462	p1.40	XbaI	c	5.2kb	CAST
J:19190	intron 2 probe	BamHI	a	6.7kb	129/Sv, NZW
			b	~11.6kb	I/LnJ, MOLF/EiJ, RIIIS/J
			d	3.2kb	MA/MyJ
J:25567	NZW.Bam	BamHI	n	not given	NFS/N
J:25567	NZW.Bam	BamHI	s	not given	M. spretus
J:25567	NZW.Bam	BstEII	m	not given	M. m. musculus
J:25567	NZW.Bam	BstEII	n	not given	NFS/N

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