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subclone 9 Probe Detail
Nucleotide
Probe/Clone
  • Name
    subclone 9
  • Sequence Type
    cDNA
  • ID
    MGI:23453
  • Insert Site
    EcoRI
  • Insert Size
    800bp
  • Note
    Hybridizes to the 3' untranslated portion of Prn-p.
Source
  • Species
    mouse, laboratory
Genes
Prnp prion protein
Polymorphisms
J:9736 Carlson GA, et al., Mol Cell Biol. 1988 Dec;8(12):5528-40
Endonuclease Gene Allele Fragments Strains
BstEII Prnp a 5.7,3.5kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 15.7kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 5.7,3.5kb RIIIS/J
d 5.7,3.5kb MA/MyJ
e 5.7,3.5kb CAST/EiJ
f 12.2,3.5kb MOLF/EiJ
EcoRI Prnp a 4.2kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 9.4kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 4.2kb RIIIS/J
d 4.2kb MA/MyJ
e 9.7kb CAST/EiJ
f 4.2kb MOLF/EiJ
SacI Prnp a 10.9kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 12.9kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 12.9kb RIIIS/J
d 10.9kb MA/MyJ
e 12.9kb CAST/EiJ
f 12.9kb MOLF/EiJ
TaqI Prnp a 11.0kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 9.1kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 11.0kb RIIIS/J
d 13.5kb MA/MyJ
e 9.1kb CAST/EiJ
f 9.1kb MOLF/EiJ
XbaI Prnp a 3.6kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 5.2kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 5.2kb RIIIS/J
d 5.2kb MA/MyJ
e 5.2kb CAST/EiJ
f 5.2kb MOLF/EiJ
References
J:9736 Carlson GA, et al., Genetics and polymorphism of the mouse prion gene complex: control of scrapie incubation time. Mol Cell Biol. 1988 Dec;8(12):5528-40
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