RFLP Polymorphisms for H2-D1

RFLP Polymorphisms

Symbol
Name
ID
Location

H2-D1
histocompatibility 2, D region locus 1
MGI:95896
Chr 17 (18.61 cM)

Reference	Probe	Endonuclease	Allele	Fragments	Strains
J:557	0.3D	BamHI	a	6.1kb	C3.t^w5
J:557	0.3D	BamHI	b	9.7kb	C3.t¹²
J:7080	cosmid 18.1	EcoRI	a	25kb	B6.K1, B6.K2, BALB/c, C57BL/6, C57BL/6-H2-T18^a
			b	12.3kb	AKR, C57BL/6-H2^k
			c	absent	A.AL-H2^a1, A.BY-H2^bc H2-T18^f/SnJ, A.TL-H2^t1, A/WySnJ, B10.A-H2^a, B10.A-H2^h1/(1R), B10.A-H2ⁱ³/(3R), B10.AKM-H2^m/SnJ, B10.BDR1-H2^g4, B10.D2-H2^d, B10.Q-H2^q/SgJ, C3H, C57BL/10
J:7080	cosmid 18.1	HindIII	a	13.5kb	A.AL-H2^a1, A/WySnJ, B10.A-H2ⁱ³/(3R), BALB/c
			b	10.6kb	B10.BDR1-H2^g4, C3H, C57BL/6
			c	absent	A.BY-H2^bc H2-T18^f/SnJ, A.TL-H2^t1, AKR, AQR, B6.K1, B6.K2, B10.A-H2^a, B10.A-H2^h1/(1R), B10.AKM-H2^m/SnJ, B10.D2-H2^d, B10.Q-H2^q/SgJ, C57BL/6-H2-T18^a, C57BL/6-H2^k, C57BL/10
J:7253	pH-2III	EcoRI	a	23kb	C3.t^w12
J:7253	pH-2III	EcoRI	b	21kb	STOCK t^w32
J:7253	phi-7.1	EcoRI	a	24kb	B6.K1, B6.K2, C57BL/6-H2-T18^a
			b	24, 4.4kb	A/J, C57BL/6
			c	13kb	B6.AK1, C57BL/6-H2^k
J:7562	3' flanking probe	BglII	a	8.5kb	A, A.AL-H2^a1, B6.K1, B6.K2, B10.A-H2^h2/(2R), B10.A-H2ⁱ⁵/(R5)SgSn, B10.D2-H2ⁱ⁷/(107R)EgJ, C57BL/10, D2.GD-H2^g2, DBA/2
J:7562	3' flanking probe	BglII	b	absent	AKR, C3.OH-H2^o2
J:7562	Db mapping probe	BglII	a	2.75kb	B6.K1, C57BL/10
J:7562	Db mapping probe	BglII	b	2.95kb	A, AKR, B10.D2-H2ⁱ⁷/(107R)EgJ, D2.GD-H2^g2, DBA/2
J:7675	pH-2III	HindIII	a	9.5kb	C3.t¹², STOCK t^w32
			b	9.0kb	C3H-T/t^w5, C3H-T/t^w12
			c	5.8kb	C3.t^w5
J:8271	probe 1	BamHI	a	2.2, 1.8kb	A.AL-H2^a1, BALB/c
J:8271	probe 1	BamHI	b	11.5, 2.2kb	C3.OH-H2^o2, C3H
J:8271	probe 1	PstI	a	9.5kb	B6.K1, B6.K2, C57BL/6-H2-T18^a
J:8271	probe 1	PstI	b	8.0kb	C57BL/6-H2^k
J:8271	probe 7	BamHI	a	6.5, 4.8kb	B10.AKM-H2^m/SnJ, B10.D2-H2^d, BALB/c, C.B6-H2^dm5
			b	4.8kb	AKR, B10.D2-H2^dm1/EgJ, BALB/c-H2^dm2, C57BL/10
			c	6.5kb	B10.F-H2^bp5/(14R)J
J:8531	c50.2.1	PstI	a	3.6kb	B6.K1
J:8531	c50.2.1	PstI	b	absent	B6.AK1
J:11154	AW1.2.3B	KpnI	b	1.0kb	C57BL/6, C57BL/6-H2-T18^a
J:11154	AW1.2.3B	KpnI	r	0.6kb	B6.R1, B6.R4, RIIIS/J
J:11154	AW1.2.7B	BamHI	b	8.2kb	C57BL/6, C57BL/6-H2-T18^a
J:11154	AW1.2.7B	BamHI	r	10.1kb	B6.R1, B6.R2, B6.R4, RIIIS/J
J:11154	AW1.2X-B	BglII/KpnI	b	5.1kb	C57BL/6-H2-T18^a
J:11154	AW1.2X-B	BglII/KpnI	r	5.5kb	B6.R1, B6.R4
J:20100	Probe 4	BamHI	a	6.0kb	B10.D2-H2^d, BALB/c, BALB/c-H2^dm2
J:20100	Probe 4	BamHI	b	absent	BALB/c-H2^d
J:20100	Probe 4	EcoRI	a	6.0kb	B10.D2-H2^d, BALB/c, BALB/c-H2^dm2
J:20100	Probe 4	EcoRI	b	absent	BALB/c-H2^d
J:20100	Probe 4	KpnI	a	1.9kb	B10.D2-H2^d, BALB/c, BALB/c-H2^dm2
J:20100	Probe 4	KpnI	b	absent	BALB/c-H2^d
J:20105	pH-2III	BamHI	d	6.2kb	BALB/c
J:20105	pH-2III	BamHI	k	5.4kb	CBA
J:20107	probe 59.2A	BamHI	a	7.6kb	B10.D2-H2^d, BALB/c
J:20107	probe 59.2A	BamHI	b	absent	B10.D2-H2^dm1/EgJ

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