GO Annotations Graph

• Symbol: Rarb
• Name: retinoic acid receptor, beta
• ID: MGI:97857

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:17599
Molecular Function	GO:1901363	heterocyclic compound binding	ISO	J:155856
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0004879	nuclear receptor activity	IBA	J:265628
Molecular Function	GO:0046965	nuclear retinoid X receptor binding	ISO	J:155856
Molecular Function	GO:0005515	protein binding	IPI	J:160776
Molecular Function	GO:0005515	protein binding	IPI	J:304587
Molecular Function	GO:0044877	protein-containing complex binding	ISO	J:155856
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0043565	sequence-specific DNA binding	IGI	J:22384
Molecular Function	GO:0043565	sequence-specific DNA binding	IGI	J:22384
Molecular Function	GO:0043565	sequence-specific DNA binding	IGI	J:22384
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:0008270	zinc ion binding	IEA	J:72247
Cellular Component	GO:0005737	cytoplasm	IEA	J:60000
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5619411
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5619434
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5619441
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Biological Process	GO:0006915	apoptotic process	IGI	J:102847
Biological Process	GO:0060348	bone development	IGI	J:21009
Biological Process	GO:0030154	cell differentiation	IBA	J:265628
Biological Process	GO:0008283	cell population proliferation	IGI	J:54066
Biological Process	GO:0048566	embryonic digestive tract development	ISO	J:164563
Biological Process	GO:0048048	embryonic eye morphogenesis	IGI	J:102847
Biological Process	GO:0035116	embryonic hindlimb morphogenesis	IGI	J:54066
Biological Process	GO:0002068	glandular epithelial cell development	IGI	J:21009
Biological Process	GO:0002068	glandular epithelial cell development	IGI	J:21009
Biological Process	GO:0003417	growth plate cartilage development	IGI	J:149466
Biological Process	GO:0009755	hormone-mediated signaling pathway	IBA	J:265628
Biological Process	GO:0035264	multicellular organism growth	IGI	J:149466
Biological Process	GO:0061037	negative regulation of cartilage development	IMP	J:60610
Biological Process	GO:0032331	negative regulation of chondrocyte differentiation	IMP	J:60610
Biological Process	GO:2000647	negative regulation of stem cell proliferation	IGI	J:54066
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:17599
Biological Process	GO:0061351	neural precursor cell proliferation	ISO	J:155856
Biological Process	GO:0022008	neurogenesis	IMP	J:134641
Biological Process	GO:0043065	positive regulation of apoptotic process	IGI	J:102847
Biological Process	GO:0043068	positive regulation of programmed cell death	IGI	J:54066
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:22384
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:22384
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:98265
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:98265
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:22384
Biological Process	GO:0012501	programmed cell death	IGI	J:54066
Biological Process	GO:0012501	programmed cell death	IGI	J:54066
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0031641	regulation of myelination	ISO	J:155856
Biological Process	GO:0048384	retinoic acid receptor signaling pathway	IBA	J:265628
Biological Process	GO:0072089	stem cell proliferation	IGI	J:54066
Biological Process	GO:0021756	striatum development	IMP	J:134641
Biological Process	GO:0001657	ureteric bud development	IMP	J:78712
Biological Process	GO:0055012	ventricular cardiac muscle cell differentiation	IMP	J:44836