GO Annotations Graph

• Symbol: Tbp
• Name: TATA box binding protein
• ID: MGI:101838

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0017162	aryl hydrocarbon receptor binding	ISO	J:164563
Molecular Function	GO:0001046	core promoter sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	ISO	J:155856
Molecular Function	GO:0003677	DNA binding	IDA	J:138818
Molecular Function	GO:0003677	DNA binding	IDA	J:135225
Molecular Function	GO:0003677	DNA binding	IDA	J:95384
Molecular Function	GO:0140297	DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0019899	enzyme binding	ISO	J:164563
Molecular Function	GO:0005515	protein binding	IPI	J:47012
Molecular Function	GO:0005515	protein binding	IPI	J:172915
Molecular Function	GO:0005515	protein binding	IPI	J:245730
Molecular Function	GO:0005515	protein binding	IPI	J:245730
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0005515	protein binding	IPI	J:86566
Molecular Function	GO:0005515	protein binding	IPI	J:121371
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:181994
Molecular Function	GO:0005515	protein binding	IPI	J:121371
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:112691
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0005515	protein binding	IPI	J:39012
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:183633
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:182882
Molecular Function	GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	ISO	J:164563
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	ISO	J:155856
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA	J:265628
Molecular Function	GO:0001091	RNA polymerase II general transcription initiation factor binding	ISO	J:164563
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	IPI	J:146223
Molecular Function	GO:0000995	RNA polymerase III general transcription initiation factor activity	ISO	J:164563
Molecular Function	GO:0001093	TFIIB-class transcription factor binding	ISO	J:164563
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ISO	J:73065
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:83344
Cellular Component	GO:0000791	euchromatin	ISO	J:164563
Cellular Component	GO:0001674	female germ cell nucleus	IDA	J:123297
Cellular Component	GO:0001939	female pronucleus	IDA	J:123297
Cellular Component	GO:0001673	male germ cell nucleus	IDA	J:83344
Cellular Component	GO:0001940	male pronucleus	IDA	J:123297
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5211233
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5211235
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IPI	J:181994
Cellular Component	GO:0005634	nucleus	IDA	J:121371
Cellular Component	GO:0005634	nucleus	IDA	J:112691
Cellular Component	GO:0005634	nucleus	IDA	J:183633
Cellular Component	GO:0005634	nucleus	IDA	J:74970
Cellular Component	GO:0005634	nucleus	IDA	J:79959
Cellular Component	GO:0005634	nucleus	IDA	J:123297
Cellular Component	GO:0005634	nucleus	IDA	J:99784
Cellular Component	GO:0005634	nucleus	IDA	J:181994
Cellular Component	GO:0005634	nucleus	IDA	J:123297
Cellular Component	GO:0005634	nucleus	IDA	J:81991
Cellular Component	GO:0005634	nucleus	IDA	J:138818
Cellular Component	GO:0045120	pronucleus	IDA	J:113226
Cellular Component	GO:0032991	protein-containing complex	ISO	J:164563
Cellular Component	GO:0000120	RNA polymerase I transcription regulator complex	TAS	J:39012
Cellular Component	GO:0005668	RNA polymerase transcription factor SL1 complex	IPI	J:245730
Cellular Component	GO:0005668	RNA polymerase transcription factor SL1 complex	IPI	J:245730
Cellular Component	GO:0005672	transcription factor TFIIA complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:155856
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	IDA	J:245730
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:86236
Biological Process	GO:0006352	DNA-templated transcription initiation	IBA	J:265628
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:155856
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006468	protein phosphorylation	ISO	J:164563
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	ISO	J:164563
Biological Process	GO:0006366	transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006366	transcription by RNA polymerase II	IMP	J:79959
Biological Process	GO:0006383	transcription by RNA polymerase III	IMP	J:79959
Biological Process	GO:0006383	transcription by RNA polymerase III	ISO	J:73065