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Tpm3-rs2 Pseudogene Detail
Summary
  • Symbol
    Tpm3-rs2
  • Name
    tropomyosin 3, related sequence 2
  • Synonyms
    OTTMUSG00000004874
Location &
Maps
more
  • Sequence Map
    Chr4:27996583-27996905 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 11.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    96 from dbSNP Build 142
  • Strain Annotations
    19
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99710
 pseudogene Chr4:27996004-27996906 (-)
129S1/SvImJ ENSMUSG00200012656
 pseudogene Chr4:24706726-24707048 (-)
A/J ENSMUSG00195000216
 pseudogene Chr4:25234389-25234711 (-)
AKR/J ENSMUSG00220014574
 pseudogene Chr4:25004702-25005024 (-)
BALB/cJ ENSMUSG00180000255
 pseudogene Chr4:24742422-24742744 (-)
C3H/HeJ ENSMUSG00175002406
 pseudogene Chr4:25170927-25171249 (-)
C57BL/6NJ ENSMUSG00215000837
 pseudogene Chr4:24783862-24784184 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011196
 pseudogene Chr4:22672635-22672956 (-)
CAST/EiJ ENSTCUG00005000405
 pseudogene Chr4:24661421-24661743 (-)
CBA/J ENSMUSG00210004642
 pseudogene Chr4:24909852-24910174 (-)
DBA/2J ENSMUSG00185000333
 pseudogene Chr4:24982081-24982403 (-)
FVB/NJ ENSMUSG00205000540
 pseudogene Chr4:24574486-24574808 (-)
JF1/MsJ ENSUMUG00000002555
 pseudogene Chr4:24995919-24996241 (-)
LP/J ENSMUSG00230000605
 pseudogene Chr4:28296903-28297225 (-)
NOD/ShiLtJ ENSMUSG00190000367
 pseudogene Chr4:24929998-24930320 (-)
NZO/HlLtJ ENSMUSG00225008919
 pseudogene Chr4:32217249-32217571 (-)
PWK/PhJ ENSLUMG00010007587
 pseudogene Chr4:24457510-24457832 (-)
SPRET/EiJ ENSMSPG00010002611
 pseudogene Chr4:25113428-25113750 (-)
WSB/EiJ ENSIUOG00005005140
 pseudogene Chr4:24683008-24683330 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080175 Ensembl Gene Model | MGI Sequence Detail 323 C57BL/6J ±  kb
transcript ENSMUST00000116350 Ensembl | MGI Sequence Detail 323 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-16496, MGI:3649888
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:24377 Gariboldi M, et al., Chromosome mapping of nine tropomyosin-related sequences in mice. Mamm Genome. 1995 Apr;6(4):273-7
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory