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Tcp10c Gene Detail
Summary
  • Symbol
    Tcp10c
  • Name
    t-complex protein 10c
  • Synonyms
    D17Leh66C, D17Leh66ca, Gm9880, T66C-a, Tcp-10c
Location &
Maps
more
  • Sequence Map
    Chr17:13574834-13597485 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.86 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    4
  • RFLP
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98543
 protein coding gene Chr17:13574834-13597485 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021073
 protein coding gene Chr17:9061083-9081860 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0022820
 protein coding gene Chr17:5055383-5078101 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0023604
 protein coding gene Chr17:11048717-11077242 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TCP10L, t-complex 10 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCP10L, t-complex 10 like
  • Synonyms
    C21orf77, LINC00846, PRED77, TCP10A-1, TCP10A-2
  • Links
    NCBI Gene ID: 140290
    neXtProt AC: NX_Q8TDR4
    UniProt: Q8TDR4

  • Chr Location
    21q22.11; chr21:32497967-32587373 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100041352 NCBI Gene Model | MGI Sequence Detail 22652 C57BL/6J ±  kb
transcript NM_001167578 RefSeq | MGI Sequence Detail 2528 ZRU/MplStud  
polypeptide NP_001161050 RefSeq | MGI Sequence Detail 482 ZRU/MplStud  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR009852 Centromere protein J, C-terminal domain
    IPR047002 T-complex protein 10, C-terminal domain superfamily
    IPR026581 T-complex protein 10 family
Molecular
Reagents
less
  • All nucleic 28
    Genomic 18
    cDNA 10

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-14814, MGD-MRK-14834, MGD-MRK-4532, MGI:3711246
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:7328 Rohme D, et al., Molecular clones of the mouse t complex derived from microdissected metaphase chromosomes. Cell. 1984 Mar;36(3):783-8
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory