Prn MGI Mouse Gene Detail - MGI:97767 - prion protein readthrough transcript

Sequence Map

Chr2:131751877-131798050 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_97767	protein coding gene	Chr2:131751848-131798051 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0026535	protein coding gene	Chr2:135470006-135511264 (+)
A/J	MGP_AJ_G0026499	protein coding gene	Chr2:129962259-129996944 (+)
AKR/J	MGP_AKRJ_G0026474	protein coding gene	Chr2:133697763-133733925 (+)
BALB/cJ	MGP_BALBcJ_G0026511	protein coding gene	Chr2:130355753-130389597 (+)
C3H/HeJ	MGP_C3HHeJ_G0026254	protein coding gene	Chr2:134165224-134201183 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0026956	protein coding gene	Chr2:139605162-139642487 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0024333	protein coding gene	Chr2:124695809-124728770 (+)
CAST/EiJ	MGP_CASTEiJ_G0025715	protein coding gene	Chr2:134476022-134512182 (+)
CBA/J	MGP_CBAJ_G0026234	protein coding gene	Chr2:144835585-144871498 (+)
DBA/2J	MGP_DBA2J_G0026368	protein coding gene	Chr2:129359360-129393489 (+)
FVB/NJ	MGP_FVBNJ_G0026332	protein coding gene	Chr2:127980282-128014233 (+)
LP/J	MGP_LPJ_G0026473	protein coding gene	Chr2:135683614-135719627 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0026352	protein coding gene	Chr2:148632553-148667294 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0027011	protein coding gene	Chr2:133681024-133719335 (+)
PWK/PhJ	MGP_PWKPhJ_G0025451	protein coding gene	Chr2:128941944-128976939 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0025253	protein coding gene	Chr2:132829823-132870010 (+)
WSB/EiJ	MGP_WSBEiJ_G0025789	protein coding gene	Chr2:134601473-134639589 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000098754	Ensembl Gene Model \| MGI Sequence Detail	46174	C57BL/6J	± kb
transcript	ENSMUST00000124100	Ensembl \| MGI Sequence Detail	2132	Not Applicable
polypeptide	ENSMUSP00000116195	Ensembl \| MGI Sequence Detail	197	Not Applicable

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MGD-MRK-13620, MGI:5547781, MGI:5753213

Summaries

All 37
Earliest

J:8350 Carlson GA, et al., Linkage of prion protein and scrapie incubation time genes. Cell. 1986 Aug 15;46(4):503-11
Latest

J:237304 Slapsak U, et al., The N Terminus of the Prion Protein Mediates Functional Interactions with the Neuronal Cell Adhesion Molecule (NCAM) Fibronectin Domain. J Biol Chem. 2016 Oct 14;291(42):21857-21868

Prn Cluster contains:

More Data for these features

Member	Feature Type	Location
Prnp, prion protein	protein coding gene	Chr2:131751848-131780349 (+)
Prnd, prion like protein doppel	protein coding gene	Chr2:131792781-131798050 (+)

TSS for Prn:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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