M6pr-ps Pseudogene Detail

Summary

• Symbol
  M6pr-ps
• Name
  mannose-6-phosphate receptor, pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:96905
  NCBI Gene: 17114
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:99407866-99408695 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 43.10 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  19
• RFLP
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_96905	pseudogene	Chr3:99407486-99409932 (+)
129S1/SvImJ	ENSMUSG00200046095	pseudogene	Chr3:96016148-96016977 (+)
A/J	ENSMUSG00195049506	pseudogene	Chr3:96396025-96396854 (+)
AKR/J	ENSMUSG00220043951	pseudogene	Chr3:94762985-94763814 (+)
BALB/cJ	ENSMUSG00180043938	pseudogene	Chr3:96338458-96339287 (+)
C3H/HeJ	ENSMUSG00175031231	pseudogene	Chr3:95959563-95960392 (+)
C57BL/6NJ	ENSMUSG00215039798	pseudogene	Chr3:96665276-96666105 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020716	pseudogene	Chr3:96625069-96625898 (+)
CAST/EiJ	ENSTCUG00005000391	pseudogene	Chr3:5438393-5439226 (+)
CBA/J	ENSMUSG00210051717	pseudogene	Chr3:96507162-96507991 (+)
DBA/2J	ENSMUSG00185045085	pseudogene	Chr3:96989934-96990763 (+)
FVB/NJ	ENSMUSG00205031885	pseudogene	Chr3:95580976-95581805 (+)
JF1/MsJ	ENSUMUG00000050907	pseudogene	Chr3:95733054-95733884 (+)
LP/J	ENSMUSG00230046714	pseudogene	Chr3:98944457-98945286 (+)
NOD/ShiLtJ	ENSMUSG00190049649	pseudogene	Chr3:97160221-97161050 (+)
NZO/HlLtJ	ENSMUSG00225013001	pseudogene	Chr3:101366611-101367440 (+)
PWK/PhJ	ENSLUMG00010033073	pseudogene	Chr3:95826554-95827384 (+)
SPRET/EiJ	ENSMSPG00010046132	pseudogene	Chr3:95997277-95998145 (+)
WSB/EiJ	ENSIUOG00005031752	pseudogene	Chr3:96521757-96522586 (+)

Homology

• Gene Tree
  M6pr-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving M6pr-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000080832 (Evidence)
• NCBI Gene
  17114

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080832	Ensembl Gene Model | MGI Sequence Detail	830	C57BL/6J
transcript	ENSMUST00000120481	Ensembl | MGI Sequence Detail	830	Not Applicable

Molecular
Reagents

• All nucleic 2

  Genomic 1

  cDNA 1

Other
Accession IDs

MGD-MRK-12092

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 4
• Earliest
  J:1218 Ludwig T, et al., Gene and pseudogene of the mouse cation-dependent mannose 6-phosphate receptor. Genomic organization, expression, and chromosomal localization. J Biol Chem. 1992 Jun 15;267(17):12211-9
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426