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Hba-ps4 Pseudogene Detail
Summary
  • Symbol
    Hba-ps4
  • Name
    hemoglobin alpha, pseudogene 4
  • Synonyms
    Hba-4ps, Hba-a4
  • Feature Type
    pseudogene
  • IDs
    MGI:96018
    NCBI Gene: 383229
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:26505337-26506035 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 13.11 cM
  • Mapping Data
    83 experiments
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_96018
pseudogene Chr17:26505253-26506035 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040144
pseudogene Chr17:25447733-25448431 (-)
A/J MGP_AJ_G0040137
pseudogene Chr17:24681980-24682678 (-)
AKR/J MGP_AKRJ_G0040062
pseudogene Chr17:24794931-24795629 (-)
BALB/cJ MGP_BALBcJ_G0040122
pseudogene Chr17:24904223-24904921 (-)
C3H/HeJ MGP_C3HHeJ_G0039771
pseudogene Chr17:25185966-25186664 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040713
pseudogene Chr17:26501156-26501854 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037182
pseudogene Chr17:22134874-22135589 (-)
CAST/EiJ MGP_CASTEiJ_G0038862
pseudogene Chr17:25108298-25108996 (-)
CBA/J MGP_CBAJ_G0039737
pseudogene Chr17:27458040-27458738 (-)
DBA/2J MGP_DBA2J_G0039934
pseudogene Chr17:24274858-24275556 (-)
FVB/NJ MGP_FVBNJ_G0039894
pseudogene Chr17:24037784-24038482 (-)
LP/J MGP_LPJ_G0039979
pseudogene Chr17:25721193-25721891 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039883
pseudogene Chr17:27016941-27017639 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040813
pseudogene Chr17:25152255-25152953 (-)
PWK/PhJ MGP_PWKPhJ_G0038554
pseudogene Chr17:23048907-23049605 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038258
pseudogene Chr17:23209532-23210234 (-)
WSB/EiJ MGP_WSBEiJ_G0039087
pseudogene Chr17:25176400-25177099 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Endonuclease-mediated
    1
  • Gene trapped
    1
  • Radiation induced
    2
  • Genomic Mutations
    2 involving Hba-ps4
  • Find Mice (IMSR)
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084893 Ensembl Gene Model | MGI Sequence Detail 699 C57BL/6J ±  kb
transcript ENSMUST00000128900 Ensembl | MGI Sequence Detail 447 Not Applicable  
For the selected sequence
Molecular
Reagents
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  • All nucleic 20
    Genomic 14
    Primer pair 2
    Other 4
Other
Accession IDs
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MGD-MRK-10625, MGD-MRK-10628, MGD-MRK-10630, MGI:3649055
References
more
  • Summaries
    All 67
    Phenotypes 6
  • Earliest
    J:6586 Leder A, et al., Dispersion of alpha-like globin genes of the mouse to three different chromosomes. Nature. 1981 Sep 17-23;293(5829):196-200
  • Latest
    J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory