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D17H6S53E Gene Detail
Summary
  • Symbol
    D17H6S53E
  • Name
    DNA segment, Chr 17, human D6S53E
  • Synonyms
    NG34
  • Feature Type
    protein coding gene
  • IDs
    MGI:90673
    NCBI Gene: 114585
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35345378-35347831 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.59 cM
Strain
Comparison
more
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_90673
 protein coding gene Chr17:35345349-35347831 (+)
129S1/SvImJ ENSMUSG00200050865
 protein coding gene Chr17:31048858-31052358 (+)
A/J ENSMUSG00195033649
 protein coding gene Chr17:31951228-31954712 (+)
AKR/J ENSMUSG00220051481
 protein coding gene Chr17:30978114-30981573 (+)
BALB/cJ ENSMUSG00180040476
 protein coding gene Chr17:31321085-31324569 (+)
C3H/HeJ ENSMUSG00175033003
 protein coding gene Chr17:30864221-30867680 (+)
C57BL/6NJ ENSMUSG00215052622
 protein coding gene Chr17:30889080-30892579 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021507
 protein coding gene Chr17:31869007-31871477 (+)
CAST/EiJ ENSTCUG00005050127
 protein coding gene Chr17:31906624-31910104 (+)
CBA/J ENSMUSG00210039753
 protein coding gene Chr17:30686324-30689783 (+)
DBA/2J ENSMUSG00185051756
 protein coding gene Chr17:33340325-33343808 (+)
FVB/NJ ENSMUSG00205052608
 protein coding gene Chr17:31206535-31210010 (+)
JF1/MsJ ENSUMUG00000057154
 protein coding gene Chr17:32591915-32595033 (+)
LP/J ENSMUSG00230054512
 protein coding gene Chr17:34447107-34450606 (+)
NOD/ShiLtJ ENSMUSG00190032274
 protein coding gene Chr17:30807673-30811173 (+)
NZO/HlLtJ ENSMUSG00225054655
 protein coding gene Chr17:36459591-36463067 (+)
PWK/PhJ ENSLUMG00010032910
 protein coding gene Chr17:30425765-30429281 (+)
SPRET/EiJ ENSMSPG00010030760
 protein coding gene Chr17:31610177-31612174 (+)
WSB/EiJ ENSIUOG00005047692
 protein coding gene Chr17:31535166-31538675 (+)



Homology
more
  • Human Ortholog
    C6orf47, chromosome 6 open reading frame 47
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C6orf47, chromosome 6 open reading frame 47
  • Synonyms
    D6S53E, G4, NG34
  • Links
    NCBI Gene ID: 57827
    UniProt: O95873

  • Chr Location
    6p21.33; chr6:31658298-31660778 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 114585 NCBI Gene Model | MGI Sequence Detail 2454 C57BL/6J ±  kb
transcript NM_033477 RefSeq | MGI Sequence Detail 2126 ZRU/MplStud  
polypeptide Q9Z1R4 UniProt | EBI | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-4480
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:14354 Lund T, et al., RFLP analysis of the MHC class III region defines unique haplotypes for the non-obese diabetic, cataract Shionogi and the non-obese non-diabetic mouse strains. Diabetologia. 1993 Aug;36(8):727-33
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory