Klk1b18-ps Pseudogene Detail

Summary

• Symbol
  Klk1b18-ps
• Name
  kallikrein 1-related peptidase b18, pseudogene
• Synonyms
  Klk-ps7, mGK-18

• Feature Type
  pseudogene
• IDs
  MGI:892024
  NCBI Gene: 16609
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:43670271-43671000 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.51 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_892024	pseudogene	Chr7:43670244-43671000 (+)
129S1/SvImJ	ENSMUSG00200032872	pseudogene	Chr7:31256246-31256975 (+)
A/J	ENSMUSG00195049917	pseudogene	Chr7:35302753-35303822 (+)
AKR/J	ENSMUSG00220053539	pseudogene	Chr7:29594525-29595254 (+)
BALB/cJ	ENSMUSG00180042343	pseudogene	Chr7:32178247-32179316 (+)
C3H/HeJ	ENSMUSG00175044076	pseudogene	Chr7:32692177-32692906 (+)
C57BL/6NJ	ENSMUSG00215046899	pseudogene	Chr7:31962007-31962736 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048406	pseudogene	Chr7:35695375-35696104 (+)
CBA/J	ENSMUSG00210049484	pseudogene	Chr7:33068899-33069628 (+)
DBA/2J	ENSMUSG00185048042	pseudogene	Chr7:36949576-36950305 (+)
FVB/NJ	ENSMUSG00205050058	pseudogene	Chr7:32614123-32614852 (+)
JF1/MsJ	ENSUMUG00000053784	pseudogene	Chr7:41436684-41437413 (+)
LP/J	ENSMUSG00230051784	pseudogene	Chr7:42376941-42378010 (+)
NOD/ShiLtJ	ENSMUSG00190049939	pseudogene	Chr7:32936326-32937055 (+)
NZO/HlLtJ	ENSMUSG00225020206	pseudogene	Chr7:40587895-40588964 (+)
PWK/PhJ	ENSLUMG00010049318	pseudogene	Chr7:31851105-31851834 (+)
SPRET/EiJ	ENSMSPG00010046703	pseudogene	Chr7:31659796-31660524 (+)
WSB/EiJ	ENSIUOG00005031957	pseudogene	Chr7:33506461-33507530 (+)

Homology

• Gene Tree
  Klk1b18-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000108759 (Evidence)
• NCBI Gene
  16609

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108759	Ensembl Gene Model | MGI Sequence Detail	730	C57BL/6J
transcript	ENSMUST00000205780	Ensembl | MGI Sequence Detail	167	Not Applicable

Molecular
Reagents

• All nucleic 84

  Genomic 82

  cDNA 2

References

• Summaries
  All 11
• Earliest
  J:7072 Mason AJ, et al., Structure of mouse kallikrein gene family suggests a role in specific processing of biologically active peptides. Nature. 1983 May 26;303(5915):300-7
• Latest
  J:90604 Olsson AY, et al., Taxon-specific evolution of glandular kallikrein genes and identification of a progenitor of prostate-specific antigen. Genomics. 2004 Jul;84(1):147-56

TSS for Klk1b18-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66094	Chr7:43670227-43670235 (+)	-40 bp