Apon MGI Mouse Gene Detail - MGI:88931

Symbol

Apon
Name

apolipoprotein N
Synonyms

D10Ucla2

Feature Type

protein coding gene
IDs

MGI:88931
NCBI Gene: 28194
Alliance

gene page
Transcription Start Sites

3 TSS

Sequence Map

Chr10:128090000-128091770 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 10, 76.50 cM
Mapping Data

4 experiments

SNPs within 2kb

71 from dbSNP Build 142
Strain Annotations

18
RFLP

1

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_88931	protein coding gene	Chr10:128089965-128091770 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0017854	protein coding gene	Chr10:131965377-131967147 (+)
A/J	MGP_AJ_G0017829	protein coding gene	Chr10:126676035-126677805 (+)
AKR/J	MGP_AKRJ_G0017792	protein coding gene	Chr10:130396798-130398568 (+)
BALB/cJ	MGP_BALBcJ_G0017793	protein coding gene	Chr10:127053378-127055148 (+)
C3H/HeJ	MGP_C3HHeJ_G0017616	protein coding gene	Chr10:130547121-130548891 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0018248	protein coding gene	Chr10:136441987-136443757 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015926	protein coding gene	Chr10:120614835-120616598 (+)
CAST/EiJ	MGP_CASTEiJ_G0017177	protein coding gene	Chr10:131267665-131269425 (+)
CBA/J	MGP_CBAJ_G0017586	protein coding gene	Chr10:141974309-141976079 (+)
DBA/2J	MGP_DBA2J_G0017692	protein coding gene	Chr10:125738680-125740450 (+)
FVB/NJ	MGP_FVBNJ_G0017687	protein coding gene	Chr10:124668015-124669785 (+)
LP/J	MGP_LPJ_G0017766	protein coding gene	Chr10:132561519-132563289 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017715	protein coding gene	Chr10:144578978-144580748 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018288	protein coding gene	Chr10:130492216-130493986 (+)
PWK/PhJ	MGP_PWKPhJ_G0016962	protein coding gene	Chr10:125996520-125998279 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0016751	protein coding gene	Chr10:129583650-129585420 (+)
WSB/EiJ	MGP_WSBEiJ_G0017236	protein coding gene	Chr10:130708410-130710180 (+)

Human Ortholog

APONP, apolipoprotein N, pseudogene

Vertebrate Orthologs

2

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

APONP, apolipoprotein N, pseudogene
Links

HGNC:53942

NCBI Gene ID: 100419033
Chr Location

chr12:56376748-56377450 (-) GRCh38

MGI Vertebrate Homology

Apon stringent orthology
1 human;1 mouse;1 rat
HCOP

vertebrate homology predictions: APONP
Gene Tree

Apon

less

Phenotype Summary

1 phenotype reference

All Mutations and Alleles

1
Targeted

1
Find Mice (IMSR)

12 strains or lines available

less

All GO Annotations

4
GO References

2

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

less

Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

4

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

less

All Sequences

37
RefSeq

2
UniProt

2
CCDS

CCDS24267.1

Ensembl

ENSMUSG00000051716 (Evidence)
NCBI Gene

28194

			Length	Strain/Species	Flank
genomic	28194	NCBI Gene Model \| MGI Sequence Detail	1771	C57BL/6J	± kb
transcript	NM_133996	RefSeq \| MGI Sequence Detail	1618	ZRU/MplStud
polypeptide	NP_598757	RefSeq \| MGI Sequence Detail	251	ZRU/MplStud

less

UniProt

2 Sequences
InterPro Domains

IPR026114 Apolipoprotein F

less

All nucleic 5

cDNA 4

Other 1

Microarray probesets 2

less

MGD-MRK-2688, MGI:2143536

Summaries

All 21

Gene Ontology 2

Phenotypes 1
Earliest

J:15567 Warden CH, et al., Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Genomics. 1993 Nov;18(2):295-307
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Apon:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96371	Chr10:128090026-128090045 (+)	36 bp
Tssr96372	Chr10:128090054-128090065 (+)	60 bp
Tssr96373	Chr10:128091151-128091161 (+)	1,156 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/30/2024 MGI 6.23