Gm75300 Gene Detail

Summary

• Symbol
  Gm75300
• Name
  predicted gene, 75300

• Feature Type
  lncRNA gene
• IDs
  MGI:7833322
• Alliance
  gene page
• Transcription Start Sites
  15 TSS

Location &
Maps

• Sequence Map
  Chr2:98492845-98496870 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7833322	lncRNA gene	Chr2:98492845-98496870 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm75300
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000135968 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000135968	Ensembl Gene Model | MGI Sequence Detail	4026	C57BL/6J
transcript	ENSMUST00000333291	Ensembl | MGI Sequence Detail	559	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm75300:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr575	Chr2:98497245-98497254 (-)	-380 bp
Tssr25350	Chr2:98497211-98497234 (-)	-353 bp
Tssr25349	Chr2:98497134-98497136 (-)	-265 bp
Tssr25348	Chr2:98497004-98497038 (-)	-151 bp
Tssr25347	Chr2:98496970-98496981 (-)	-106 bp
Tssr25346	Chr2:98496849-98496873 (-)	9 bp
Tssr25345	Chr2:98496665-98496676 (-)	199 bp
Tssr25344	Chr2:98496626-98496632 (-)	241 bp
Tssr25343	Chr2:98495500-98495516 (-)	1,362 bp
Tssr25342	Chr2:98494389-98494419 (-)	2,466 bp
Tssr25341	Chr2:98494225-98494236 (-)	2,639 bp
Tssr25340	Chr2:98493320-98493338 (-)	3,541 bp
Tssr25339	Chr2:98493250-98493265 (-)	3,612 bp
Tssr25338	Chr2:98493209-98493227 (-)	3,652 bp
Tssr25337	Chr2:98493124-98493170 (-)	3,723 bp