Gm68839 Gene Detail

Summary

• Symbol
  Gm68839
• Name
  predicted gene, 68839

• Feature Type
  lncRNA gene
• IDs
  MGI:7820503
• Alliance
  gene page
• Transcription Start Sites
  8 TSS

Location &
Maps

• Sequence Map
  Chr6:70703430-70703950 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7820503	lncRNA gene	Chr6:70703430-70703950 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm68839
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000128004 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000128004	Ensembl Gene Model | MGI Sequence Detail	521	C57BL/6J
transcript	ENSMUST00000285224	Ensembl | MGI Sequence Detail	521	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm68839:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61328	Chr6:70703942-70703949 (-)	4 bp
Tssr61327	Chr6:70703851-70703871 (-)	89 bp
Tssr61326	Chr6:70703837-70703845 (-)	109 bp
Tssr61325	Chr6:70703802-70703832 (-)	133 bp
Tssr61324	Chr6:70703736-70703799 (-)	182 bp
Tssr61323	Chr6:70703646-70703722 (-)	266 bp
Tssr61322	Chr6:70703631-70703641 (-)	314 bp
Tssr61321	Chr6:70703466-70703493 (-)	470 bp