Gm61617 Gene Detail

Summary

• Symbol
  Gm61617
• Name
  predicted gene, 61617

• Feature Type
  protein coding gene
• IDs
  MGI:7806258
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:93024168-93029940 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7806258	protein coding gene	ChrX:93024168-93029940 (+)
129S1/SvImJ	ENSMUSG00200037604	protein coding gene	ChrX:74796929-74802021 (+)
A/J	ENSMUSG00195030313	protein coding gene	ChrX:78586110-78591941 (+)
AKR/J	ENSMUSG00220027172	protein coding gene	ChrX:73317527-73323357 (+)
BALB/cJ	ENSMUSG00180019427	protein coding gene	ChrX:75224983-75230814 (+)
C3H/HeJ	ENSMUSG00175018270	protein coding gene	ChrX:78948275-78954039 (+)
C57BL/6NJ	ENSMUSG00215014202	protein coding gene	ChrX:75478523-75483615 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028233	protein coding gene	ChrX:76471545-76477352 (+)
CBA/J	ENSMUSG00210032586	protein coding gene	ChrX:75658300-75664130 (+)
DBA/2J	ENSMUSG00185031221	protein coding gene	ChrX:87944176-87949267 (+)
FVB/NJ	ENSMUSG00205022478	protein coding gene	ChrX:74929763-74935593 (+)
JF1/MsJ	ENSUMUG00000017557	protein coding gene	ChrX:108781516-108786697 (+)
LP/J	ENSMUSG00230012724	protein coding gene	ChrX:94642381-94647473 (+)
NOD/ShiLtJ	ENSMUSG00190017233	protein coding gene	ChrX:74841815-74846906 (+)
NZO/HlLtJ	ENSMUSG00225045166	protein coding gene	ChrX:99778988-99784079 (+)
PWK/PhJ	ENSLUMG00010036528	protein coding gene	ChrX:74107818-74113124 (+)
SPRET/EiJ	ENSMSPG00010030555	protein coding gene	ChrX:78187739-78193636 (+)
WSB/EiJ	ENSIUOG00005041028	protein coding gene	ChrX:75505303-75511131 (+)

Homology

• Gene Tree
  Gm61617
  

Gene Ontology
(GO)
Classifications

• All GO Annotations
  2
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000121952 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121952	Ensembl Gene Model | MGI Sequence Detail	5773	C57BL/6J
transcript	ENSMUST00000249973	Ensembl | MGI Sequence Detail	5445	Not Applicable
polypeptide	ENSMUSP00000160064	Ensembl | MGI Sequence Detail	885	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR046468 Spt20-like, SEP domain
  IPR021950 Transcription factor Spt20-like

References

• Summaries
  All 3

  Gene Ontology 1
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;