Gm59815 Gene Detail

Summary

• Symbol
  Gm59815
• Name
  predicted gene, 59815

• Feature Type
  lncRNA gene
• IDs
  MGI:7802691
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr12:108730041-108732102 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7802691	lncRNA gene	Chr12:108730041-108732102 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm59815
  

Sequences &
Gene Models

• All Sequences
  4

• Ensembl
  ENSMUSG00000131361 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000131361	Ensembl Gene Model | MGI Sequence Detail	2062	C57BL/6J
transcript	ENSMUST00000305499	Ensembl | MGI Sequence Detail	728	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm59815:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117701	Chr12:108732190-108732195 (-)	-91 bp
Tssr117700	Chr12:108732064-108732104 (-)	18 bp
Tssr117699	Chr12:108732047-108732058 (-)	49 bp
Tssr117698	Chr12:108732007-108732028 (-)	84 bp
Tssr117697	Chr12:108731985-108731995 (-)	112 bp