Gm57504 Pseudogene Detail

Summary

• Symbol
  Gm57504
• Name
  predicted gene, 57504

• Feature Type
  pseudogene
• IDs
  MGI:7511966
  NCBI Gene: 115486460
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:29664989-29669623 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  353 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7511966	pseudogene	Chr7:29656427-29669623 (+)
129S1/SvImJ	ENSMUSG00200045947	pseudogene	Chr7:19431638-19449371 (+)
A/J	ENSMUSG00195050032	pseudogene	Chr7:22106773-22121587 (+)
AKR/J	ENSMUSG00220053948	pseudogene	Chr7:22365818-22380620 (-)
BALB/cJ	ENSMUSG00180020866	pseudogene	Chr7:20166213-20181021 (+)
C3H/HeJ	ENSMUSG00175038860	pseudogene	Chr7:21211135-21227872 (+)
C3H/HeJ	ENSMUSG00175045588	pseudogene	Chr7:21244488-21258447 (+)
C57BL/6NJ	ENSMUSG00215054938	pseudogene	Chr7:19343806-19360542 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029494	protein coding gene	Chr7:29195080-29197527 (+)
CAST/EiJ	ENSTCUG00005049563	pseudogene	Chr7:21144326-21159551 (+)
CBA/J	ENSMUSG00210026705	pseudogene	Chr7:20404345-20421078 (+)
DBA/2J	ENSMUSG00185054085	pseudogene	Chr7:23497417-23512221 (+)
FVB/NJ	ENSMUSG00205019256	pseudogene	Chr7:20153313-20170057 (+)
JF1/MsJ	ENSUMUG00000057302	pseudogene	Chr7:27912783-27936299 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190052813	pseudogene	Chr7:19835262-19852149 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010052216	pseudogene	Chr7:19871274-19884463 (+)
SPRET/EiJ	ENSMSPG00010051288	pseudogene	Chr7:19240692-19257113 (+)
WSB/EiJ	ENSIUOG00005053608	pseudogene	Chr7:14120935-14138890 (+)

Homology

• Gene Tree
  Gm57504
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000063623 (Evidence)
• NCBI Gene
  115486460

Representative Sequences			Length	Strain/Species
genomic	115486460	NCBI Gene Model | MGI Sequence Detail	4635	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;