Gm57467 Gene Detail

Summary

• Symbol
  Gm57467
• Name
  predicted gene, 57467

• Feature Type
  lncRNA gene
• IDs
  MGI:7338847
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:18060425-18060768 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  40 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338847	lncRNA gene	Chr2:18060425-18060768 (+)
129S1/SvImJ	ENSMUSG00200042328	lncRNA gene	Chr2:15010513-15010736 (+)
A/J	ENSMUSG00195019135	lncRNA gene	Chr2:15091660-15091883 (+)
AKR/J	ENSMUSG00220014018	lncRNA gene	Chr2:15085783-15086006 (+)
BALB/cJ	ENSMUSG00180039248	lncRNA gene	Chr2:15134570-15134793 (+)
C3H/HeJ	ENSMUSG00175023382	lncRNA gene	Chr2:15087724-15087947 (+)
C57BL/6NJ	ENSMUSG00215031713	lncRNA gene	Chr2:15185003-15185226 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004626	lncRNA gene	Chr2:14938230-14938453 (+)
CBA/J	ENSMUSG00210003797	lncRNA gene	Chr2:15133873-15134096 (+)
DBA/2J	ENSMUSG00185039247	lncRNA gene	Chr2:15036727-15036950 (+)
FVB/NJ	ENSMUSG00205015193	lncRNA gene	Chr2:15081719-15081942 (+)
JF1/MsJ	ENSUMUG00000004559	lncRNA gene	Chr2:14981982-14982203 (+)
LP/J	ENSMUSG00230020358	lncRNA gene	Chr2:16971657-16971880 (+)
NOD/ShiLtJ	ENSMUSG00190014772	lncRNA gene	Chr2:15098684-15098907 (+)
NZO/HlLtJ	ENSMUSG00225001748	lncRNA gene	Chr2:24722186-24722409 (+)
PWK/PhJ	ENSLUMG00010033396	lncRNA gene	Chr2:15074880-15075101 (+)
SPRET/EiJ	ENSMSPG00010015914	lncRNA gene	Chr2:15556254-15556477 (+)
WSB/EiJ	ENSIUOG00005016041	lncRNA gene	Chr2:15198135-15198358 (+)

Homology

• Gene Tree
  Gm57467
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121261 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121261	Ensembl Gene Model | MGI Sequence Detail	344	C57BL/6J
transcript	ENSMUST00000247641	Ensembl | MGI Sequence Detail	344	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57467:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16359	Chr2:18060515-18060544 (+)	105 bp