Gm57463 Gene Detail

Summary

• Symbol
  Gm57463
• Name
  predicted gene, 57463

• Feature Type
  lncRNA gene
• IDs
  MGI:7338839
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:164875724-164876490 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338839	lncRNA gene	Chr2:164875724-164876490 (-)
129S1/SvImJ	ENSMUSG00200017555	lncRNA gene	Chr2:161764491-161765226 (-)
A/J	ENSMUSG00195025398	lncRNA gene	Chr2:162096903-162097638 (-)
AKR/J	ENSMUSG00220014412	lncRNA gene	Chr2:161426225-161426960 (-)
BALB/cJ	ENSMUSG00180050098	lncRNA gene	Chr2:161550633-161551368 (-)
C3H/HeJ	ENSMUSG00175051556	lncRNA gene	Chr2:162301221-162301956 (-)
C57BL/6NJ	ENSMUSG00215037900	lncRNA gene	Chr2:161748651-161749386 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046387	lncRNA gene	Chr2:160667314-160668051 (-)
CBA/J	ENSMUSG00210017398	lncRNA gene	Chr2:162231233-162231968 (-)
DBA/2J	ENSMUSG00185050581	lncRNA gene	Chr2:161968337-161969072 (-)
FVB/NJ	ENSMUSG00205046124	lncRNA gene	Chr2:160989260-160989995 (-)
JF1/MsJ	ENSUMUG00000034039	lncRNA gene	Chr2:161613283-161614030 (-)
LP/J	ENSMUSG00230045929	lncRNA gene	Chr2:163525565-163526300 (-)
NOD/ShiLtJ	ENSMUSG00190048514	lncRNA gene	Chr2:161636103-161636838 (-)
NZO/HlLtJ	ENSMUSG00225053774	lncRNA gene	Chr2:171530676-171531411 (-)
PWK/PhJ	ENSLUMG00010047781	lncRNA gene	Chr2:161509328-161510085 (-)
SPRET/EiJ	ENSMSPG00010030795	lncRNA gene	Chr2:164270769-164271516 (-)
WSB/EiJ	ENSIUOG00005046377	lncRNA gene	Chr2:161362538-161363273 (-)

Homology

• Gene Tree
  Gm57463
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121236 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121236	Ensembl Gene Model | MGI Sequence Detail	767	C57BL/6J
transcript	ENSMUST00000247546	Ensembl | MGI Sequence Detail	767	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57463:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr27600	Chr2:164876448-164876498 (-)	17 bp
Tssr27599	Chr2:164876376-164876408 (-)	98 bp