Gm57450 Gene Detail

Summary

• Symbol
  Gm57450
• Name
  predicted gene, 57450

• Feature Type
  lncRNA gene
• IDs
  MGI:7338813
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:34692290-34703253 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  295 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338813	lncRNA gene	Chr2:34692290-34703253 (+)
129S1/SvImJ	ENSMUSG00200048608	lncRNA gene	Chr2:31671939-31673204 (+)
A/J	ENSMUSG00195042049	lncRNA gene	Chr2:31773746-31775011 (+)
AKR/J	ENSMUSG00220045598	lncRNA gene	Chr2:31888661-31889926 (+)
BALB/cJ	ENSMUSG00180049384	lncRNA gene	Chr2:31788317-31789582 (+)
C3H/HeJ	ENSMUSG00175045673	lncRNA gene	Chr2:31754635-31755900 (+)
C57BL/6NJ	ENSMUSG00215047733	lncRNA gene	Chr2:31821745-31823010 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018060	lncRNA gene	Chr2:31498136-31499401 (+)
CBA/J	ENSMUSG00210049691	lncRNA gene	Chr2:31827030-31828295 (+)
DBA/2J	ENSMUSG00185048105	lncRNA gene	Chr2:31686743-31688008 (+)
FVB/NJ	ENSMUSG00205039084	lncRNA gene	Chr2:31534487-31535752 (+)
JF1/MsJ	ENSUMUG00000014459	lncRNA gene	Chr2:31574515-31575716 (+)
LP/J	ENSMUSG00230047072	lncRNA gene	Chr2:33607333-33608598 (+)
NOD/ShiLtJ	ENSMUSG00190041904	lncRNA gene	Chr2:31788056-31789321 (+)
NZO/HlLtJ	ENSMUSG00225050150	lncRNA gene	Chr2:41361643-41362844 (+)
PWK/PhJ	ENSLUMG00010045548	lncRNA gene	Chr2:31670039-31671240 (+)
SPRET/EiJ	ENSMSPG00010042641	lncRNA gene	Chr2:32371846-32373099 (+)
WSB/EiJ	ENSIUOG00005041711	lncRNA gene	Chr2:31646383-31647648 (+)

Homology

• Gene Tree
  Gm57450
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000120298 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120298	Ensembl Gene Model | MGI Sequence Detail	10964	C57BL/6J
transcript	ENSMUST00000242400	Ensembl | MGI Sequence Detail	1295	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;