Gm57437 Gene Detail

Summary

• Symbol
  Gm57437
• Name
  predicted gene, 57437

• Feature Type
  lncRNA gene
• IDs
  MGI:7338787
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:146675662-146679500 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338787	lncRNA gene	Chr2:146675662-146679500 (+)
129S1/SvImJ	ENSMUSG00200031088	lncRNA gene	Chr2:143789132-143792134 (+)
A/J	ENSMUSG00195022996	lncRNA gene	Chr2:143920889-143923890 (+)
AKR/J	ENSMUSG00220045966	lncRNA gene	Chr2:143497929-143500931 (+)
BALB/cJ	ENSMUSG00180045815	lncRNA gene	Chr2:143582541-143585542 (+)
C3H/HeJ	ENSMUSG00175047034	lncRNA gene	Chr2:144129533-144132534 (+)
C57BL/6NJ	ENSMUSG00215037174	lncRNA gene	Chr2:143638823-143641825 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043465	lncRNA gene	Chr2:142788327-142791325 (+)
CBA/J	ENSMUSG00210045885	lncRNA gene	Chr2:144048732-144051734 (+)
DBA/2J	ENSMUSG00185049412	lncRNA gene	Chr2:143667691-143670693 (+)
FVB/NJ	ENSMUSG00205040054	lncRNA gene	Chr2:142860402-142863404 (+)
JF1/MsJ	ENSUMUG00000046188	lncRNA gene	Chr2:143457456-143460457 (+)
LP/J	ENSMUSG00230036148	lncRNA gene	Chr2:145371549-145374551 (+)
NOD/ShiLtJ	ENSMUSG00190044944	lncRNA gene	Chr2:143727311-143730305 (+)
NZO/HlLtJ	ENSMUSG00225005958	lncRNA gene	Chr2:153360018-153363020 (+)
PWK/PhJ	ENSLUMG00010047142	lncRNA gene	Chr2:143488393-143491390 (+)
SPRET/EiJ	ENSMSPG00010030695	lncRNA gene	Chr2:145964498-145967510 (+)
WSB/EiJ	ENSIUOG00005047326	lncRNA gene	Chr2:143495779-143498773 (+)

Homology

• Gene Tree
  Gm57437
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000120393 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120393	Ensembl Gene Model | MGI Sequence Detail	3839	C57BL/6J
transcript	ENSMUST00000246623	Ensembl | MGI Sequence Detail	3052	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm57437:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20611	Chr2:146676530-146676570 (+)	888 bp