Gm57435 Gene Detail

Summary

• Symbol
  Gm57435
• Name
  predicted gene, 57435

• Feature Type
  lncRNA gene
• IDs
  MGI:7338783
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:32855798-32857163 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338783	lncRNA gene	Chr2:32855798-32857163 (-)
129S1/SvImJ	ENSMUSG00200053568	lncRNA gene	Chr2:29828799-29829356 (-)
A/J	ENSMUSG00195050490	lncRNA gene	Chr2:29932397-29932954 (-)
AKR/J	ENSMUSG00220053698	lncRNA gene	Chr2:30050315-30050872 (-)
BALB/cJ	ENSMUSG00180054366	lncRNA gene	Chr2:29945082-29945639 (-)
C3H/HeJ	ENSMUSG00175053904	lncRNA gene	Chr2:29911476-29912033 (-)
C57BL/6NJ	ENSMUSG00215050226	lncRNA gene	Chr2:29976981-29977538 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053464	lncRNA gene	Chr2:29658167-29658724 (-)
CBA/J	ENSMUSG00210017919	lncRNA gene	Chr2:29984015-29984572 (-)
DBA/2J	ENSMUSG00185052945	lncRNA gene	Chr2:29845633-29846190 (-)
FVB/NJ	ENSMUSG00205051303	lncRNA gene	Chr2:29692395-29692952 (-)
JF1/MsJ	ENSUMUG00000056226	lncRNA gene	Chr2:29733255-29733812 (-)
LP/J	ENSMUSG00230047467	lncRNA gene	Chr2:31764306-31764863 (-)
NOD/ShiLtJ	ENSMUSG00190053600	lncRNA gene	Chr2:29946745-29947302 (-)
NZO/HlLtJ	ENSMUSG00225010780	lncRNA gene	Chr2:39518134-39518691 (-)
PWK/PhJ	ENSLUMG00010052692	lncRNA gene	Chr2:29826570-29827127 (-)
SPRET/EiJ	ENSMSPG00010043790	lncRNA gene	Chr2:30535122-30535653 (-)
WSB/EiJ	ENSIUOG00005052896	lncRNA gene	Chr2:29795920-29796477 (-)

Homology

• Gene Tree
  Gm57435
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120864 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120864	Ensembl Gene Model | MGI Sequence Detail	1366	C57BL/6J
transcript	ENSMUST00000246191	Ensembl | MGI Sequence Detail	1366	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57435:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr23577	Chr2:32856886-32856906 (-)	267 bp