Gm57370 Gene Detail

Summary

• Symbol
  Gm57370
• Name
  predicted gene, 57370

• Feature Type
  lncRNA gene
• IDs
  MGI:7338653
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:52235425-52251888 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  563 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338653	lncRNA gene	Chr11:52235425-52251888 (-)
129S1/SvImJ	ENSMUSG00200040800	lncRNA gene	Chr11:49243746-49244736 (-)
A/J	ENSMUSG00195037422	lncRNA gene	Chr11:49181065-49182055 (-)
AKR/J	ENSMUSG00220041351	lncRNA gene	Chr11:49369951-49370941 (-)
BALB/cJ	ENSMUSG00180037206	lncRNA gene	Chr11:49242491-49243481 (-)
C3H/HeJ	ENSMUSG00175039685	lncRNA gene	Chr11:49212485-49213475 (-)
C57BL/6NJ	ENSMUSG00215038799	lncRNA gene	Chr11:49035197-49036187 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044659	lncRNA gene	Chr11:48809264-48810257 (-)
CBA/J	ENSMUSG00210030397	lncRNA gene	Chr11:49068450-49069440 (-)
DBA/2J	ENSMUSG00185028864	lncRNA gene	Chr11:49276497-49277490 (-)
FVB/NJ	ENSMUSG00205038437	lncRNA gene	Chr11:49110826-49111816 (-)
JF1/MsJ	ENSUMUG00000041599	lncRNA gene	Chr11:49644579-49645578 (-)
LP/J	ENSMUSG00230033744	lncRNA gene	Chr11:50461623-50462613 (-)
NOD/ShiLtJ	ENSMUSG00190044463	lncRNA gene	Chr11:49336015-49337008 (-)
NZO/HlLtJ	ENSMUSG00225033333	lncRNA gene	Chr11:52500418-52501411 (-)
PWK/PhJ	ENSLUMG00010034271	lncRNA gene	Chr11:49096707-49097702 (-)
SPRET/EiJ	ENSMSPG00010020887	lncRNA gene	Chr11:49764240-49765229 (-)
WSB/EiJ	ENSIUOG00005042731	lncRNA gene	Chr11:49128954-49129947 (-)

Homology

• Gene Tree
  Gm57370
  

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000119956 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119956	Ensembl Gene Model | MGI Sequence Detail	16464	C57BL/6J
transcript	ENSMUST00000240808	Ensembl | MGI Sequence Detail	1295	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57370:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr107894	Chr11:52251790-52251840 (-)	73 bp
Tssr107893	Chr11:52251766-52251782 (-)	114 bp