Gm57368 Gene Detail

Summary

• Symbol
  Gm57368
• Name
  predicted gene, 57368

• Feature Type
  lncRNA gene
• IDs
  MGI:7338649
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:120055579-120057293 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338649	lncRNA gene	Chr11:120055579-120057293 (+)
129S1/SvImJ	ENSMUSG00200052776	lncRNA gene	Chr11:117418514-117420216 (+)
A/J	ENSMUSG00195032149	lncRNA gene	Chr11:117093525-117095227 (+)
AKR/J	ENSMUSG00220031481	lncRNA gene	Chr11:117243928-117245632 (+)
BALB/cJ	ENSMUSG00180052267	lncRNA gene	Chr11:117386231-117387935 (+)
C3H/HeJ	ENSMUSG00175047956	lncRNA gene	Chr11:117344168-117345864 (+)
C57BL/6NJ	ENSMUSG00215047115	lncRNA gene	Chr11:116914071-116915773 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036858	lncRNA gene	Chr11:116772777-116774459 (+)
CBA/J	ENSMUSG00210050627	lncRNA gene	Chr11:117058191-117059885 (+)
DBA/2J	ENSMUSG00185026988	lncRNA gene	Chr11:117371347-117373041 (+)
FVB/NJ	ENSMUSG00205046690	lncRNA gene	Chr11:117219056-117220746 (+)
JF1/MsJ	ENSUMUG00000053476	lncRNA gene	Chr11:117670817-117672501 (+)
LP/J	ENSMUSG00230051070	lncRNA gene	Chr11:118437145-118438839 (+)
NOD/ShiLtJ	ENSMUSG00190050386	lncRNA gene	Chr11:117442484-117444188 (+)
NZO/HlLtJ	ENSMUSG00225053952	lncRNA gene	Chr11:120586119-120587821 (+)
PWK/PhJ	ENSLUMG00010024226	lncRNA gene	Chr11:117180792-117182476 (+)
SPRET/EiJ	ENSMSPG00010043195	lncRNA gene	Chr11:117764907-117766605 (+)
WSB/EiJ	ENSIUOG00005049318	lncRNA gene	Chr11:117184630-117186332 (+)

Homology

• Gene Tree
  Gm57368
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120866 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120866	Ensembl Gene Model | MGI Sequence Detail	1715	C57BL/6J
transcript	ENSMUST00000246199	Ensembl | MGI Sequence Detail	1715	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57368:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr106271	Chr11:120055600-120055618 (+)	30 bp