Gm57367 Gene Detail

Summary

• Symbol
  Gm57367
• Name
  predicted gene, 57367

• Feature Type
  lncRNA gene
• IDs
  MGI:7338647
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:51987424-51989702 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338647	lncRNA gene	Chr11:51987424-51989702 (-)
129S1/SvImJ	ENSMUSG00200040937	lncRNA gene	Chr11:48980987-48982243 (-)
A/J	ENSMUSG00195038423	lncRNA gene	Chr11:48918276-48919532 (-)
AKR/J	ENSMUSG00220039765	lncRNA gene	Chr11:49107176-49108432 (-)
BALB/cJ	ENSMUSG00180038589	lncRNA gene	Chr11:48979686-48980942 (-)
C3H/HeJ	ENSMUSG00175040636	lncRNA gene	Chr11:48949720-48950976 (-)
C57BL/6NJ	ENSMUSG00215038376	lncRNA gene	Chr11:48851160-48852416 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044699	lncRNA gene	Chr11:48538751-48540007 (-)
CBA/J	ENSMUSG00210030252	lncRNA gene	Chr11:48805684-48806940 (-)
DBA/2J	ENSMUSG00185028539	lncRNA gene	Chr11:49006406-49007662 (-)
FVB/NJ	ENSMUSG00205038703	lncRNA gene	Chr11:48848059-48849315 (-)
JF1/MsJ	ENSUMUG00000043710	lncRNA gene	Chr11:49381563-49382819 (-)
LP/J	ENSMUSG00230033656	lncRNA gene	Chr11:50198866-50200122 (-)
NOD/ShiLtJ	ENSMUSG00190042840	lncRNA gene	Chr11:49092536-49093792 (-)
NZO/HlLtJ	ENSMUSG00225032987	lncRNA gene	Chr11:52230404-52231660 (-)
PWK/PhJ	ENSLUMG00010035644	lncRNA gene	Chr11:48834631-48835887 (-)
SPRET/EiJ	ENSMSPG00010020681	lncRNA gene	Chr11:49495054-49496310 (-)
WSB/EiJ	ENSIUOG00005041899	lncRNA gene	Chr11:48865306-48866562 (-)

Homology

• Gene Tree
  Gm57367
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120196 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120196	Ensembl Gene Model | MGI Sequence Detail	2279	C57BL/6J
transcript	ENSMUST00000241835	Ensembl | MGI Sequence Detail	2279	Not Applicable

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm57367:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr107845	Chr11:51989342-51989360 (-)	351 bp