Gm57365 Gene Detail

Summary

• Symbol
  Gm57365
• Name
  predicted gene, 57365

• Feature Type
  lncRNA gene
• IDs
  MGI:7338643
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:85200880-85201996 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338643	lncRNA gene	Chr11:85200880-85201996 (-)
129S1/SvImJ	ENSMUSG00200020440	lncRNA gene	Chr11:82341192-82342180 (-)
A/J	ENSMUSG00195009409	lncRNA gene	Chr11:82195770-82196758 (-)
AKR/J	ENSMUSG00220012384	lncRNA gene	Chr11:82403433-82404420 (-)
BALB/cJ	ENSMUSG00180011498	lncRNA gene	Chr11:82391708-82392697 (-)
C3H/HeJ	ENSMUSG00175032288	lncRNA gene	Chr11:82342581-82343569 (-)
C57BL/6NJ	ENSMUSG00215030561	lncRNA gene	Chr11:81975351-81976340 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046557	lncRNA gene	Chr11:81903672-81904659 (-)
CBA/J	ENSMUSG00210039903	lncRNA gene	Chr11:82160189-82161177 (-)
DBA/2J	ENSMUSG00185020255	lncRNA gene	Chr11:82484944-82485931 (-)
FVB/NJ	ENSMUSG00205021440	lncRNA gene	Chr11:82279404-82280393 (-)
JF1/MsJ	ENSUMUG00000031458	lncRNA gene	Chr11:82806468-82807455 (-)
LP/J	ENSMUSG00230029953	lncRNA gene	Chr11:83510239-83511227 (-)
NOD/ShiLtJ	ENSMUSG00190020045	lncRNA gene	Chr11:82491451-82492440 (-)
NZO/HlLtJ	ENSMUSG00225040142	lncRNA gene	Chr11:85627993-85628981 (-)
PWK/PhJ	ENSLUMG00010033136	lncRNA gene	Chr11:82305826-82306815 (-)
SPRET/EiJ	ENSMSPG00010029876	lncRNA gene	Chr11:82778906-82779891 (-)
WSB/EiJ	ENSIUOG00005007976	lncRNA gene	Chr11:82301964-82302953 (-)

Homology

• Gene Tree
  Gm57365
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000120855 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120855	Ensembl Gene Model | MGI Sequence Detail	1117	C57BL/6J
transcript	ENSMUST00000246130	Ensembl | MGI Sequence Detail	1117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57365:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr109809	Chr11:85202879-85202923 (-)	-905 bp
Tssr109808	Chr11:85201898-85201929 (-)	82 bp