Gm57361 Gene Detail

Summary

• Symbol
  Gm57361
• Name
  predicted gene, 57361

• Feature Type
  lncRNA gene
• IDs
  MGI:7338635
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:4200516-4203141 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338635	lncRNA gene	Chr11:4200516-4203141 (+)
129S1/SvImJ	ENSMUSG00200034242	lncRNA gene	Chr11:1154978-1155474 (+)
A/J	ENSMUSG00195024098	lncRNA gene	Chr11:1062666-1063162 (+)
AKR/J	ENSMUSG00220009193	lncRNA gene	Chr11:1075327-1075823 (+)
BALB/cJ	ENSMUSG00180027453	lncRNA gene	Chr11:1084965-1085461 (+)
C3H/HeJ	ENSMUSG00175010429	lncRNA gene	Chr11:1074749-1075245 (+)
C57BL/6NJ	ENSMUSG00215031682	lncRNA gene	Chr11:1085157-1085653 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039216	lncRNA gene	Chr11:1169867-1170357 (+)
CBA/J	ENSMUSG00210018299	lncRNA gene	Chr11:1074347-1074843 (+)
DBA/2J	ENSMUSG00185018612	lncRNA gene	Chr11:1172102-1172598 (+)
FVB/NJ	ENSMUSG00205034762	lncRNA gene	Chr11:1050791-1051287 (+)
JF1/MsJ	ENSUMUG00000047342	lncRNA gene	Chr11:1333614-1334116 (+)
LP/J	ENSMUSG00230034827	lncRNA gene	Chr11:2238127-2238623 (+)
NOD/ShiLtJ	ENSMUSG00190043341	lncRNA gene	Chr11:1062383-1062879 (+)
NZO/HlLtJ	ENSMUSG00225026054	lncRNA gene	Chr11:4295342-4295838 (+)
PWK/PhJ	ENSLUMG00010019557	lncRNA gene	Chr11:1072178-1072674 (+)
SPRET/EiJ	ENSMSPG00010008765	lncRNA gene	Chr11:1148496-1148993 (+)
WSB/EiJ	ENSIUOG00005007739	lncRNA gene	Chr11:1076123-1076619 (+)

Homology

• Gene Tree
  Gm57361
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  7
• Gene trapped
  7
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000120066 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120066	Ensembl Gene Model | MGI Sequence Detail	2626	C57BL/6J
transcript	ENSMUST00000241198	Ensembl | MGI Sequence Detail	2221	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm57361:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100117	Chr11:4200629-4200636 (+)	117 bp