Gm57357 Gene Detail

Summary

• Symbol
  Gm57357
• Name
  predicted gene, 57357

• Feature Type
  lncRNA gene
• IDs
  MGI:7338627
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:75350287-75352162 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338627	lncRNA gene	Chr11:75350287-75352162 (+)
129S1/SvImJ	ENSMUSG00200051432	lncRNA gene	Chr11:72468137-72468811 (+)
A/J	ENSMUSG00195046027	lncRNA gene	Chr11:72339406-72340080 (+)
AKR/J	ENSMUSG00220048827	lncRNA gene	Chr11:72561714-72562388 (+)
BALB/cJ	ENSMUSG00180042366	lncRNA gene	Chr11:72534974-72535649 (+)
C3H/HeJ	ENSMUSG00175042137	lncRNA gene	Chr11:72504879-72505553 (+)
C57BL/6NJ	ENSMUSG00215043257	lncRNA gene	Chr11:72127867-72128541 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053655	lncRNA gene	Chr11:72030399-72031084 (+)
CBA/J	ENSMUSG00210047606	lncRNA gene	Chr11:72323354-72324028 (+)
DBA/2J	ENSMUSG00185041150	lncRNA gene	Chr11:72593352-72594026 (+)
FVB/NJ	ENSMUSG00205046677	lncRNA gene	Chr11:72431054-72431728 (+)
JF1/MsJ	ENSUMUG00000053740	lncRNA gene	Chr11:72978216-72978892 (+)
LP/J	ENSMUSG00230049451	lncRNA gene	Chr11:73623990-73624664 (+)
NOD/ShiLtJ	ENSMUSG00190046731	lncRNA gene	Chr11:72639766-72640440 (+)
NZO/HlLtJ	ENSMUSG00225039783	lncRNA gene	Chr11:75797406-75798080 (+)
PWK/PhJ	ENSLUMG00010026213	lncRNA gene	Chr11:72495478-72496156 (+)
SPRET/EiJ	ENSMSPG00010043046	lncRNA gene	Chr11:72896051-72896730 (+)
WSB/EiJ	ENSIUOG00005038259	lncRNA gene	Chr11:72493750-72494423 (+)

Homology

• Gene Tree
  Gm57357
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120712 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120712	Ensembl Gene Model | MGI Sequence Detail	1876	C57BL/6J
transcript	ENSMUST00000245376	Ensembl | MGI Sequence Detail	1259	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57357:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr102940	Chr11:75350263-75350288 (+)	-11 bp