Gm57356 Gene Detail

Summary

• Symbol
  Gm57356
• Name
  predicted gene, 57356

• Feature Type
  lncRNA gene
• IDs
  MGI:7338625
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:102319723-102321107 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338625	lncRNA gene	Chr11:102319723-102321107 (-)
129S1/SvImJ	ENSMUSG00200053623	lncRNA gene	Chr11:99606065-99607422 (-)
A/J	ENSMUSG00195052723	lncRNA gene	Chr11:99311371-99312727 (-)
AKR/J	ENSMUSG00220051956	lncRNA gene	Chr11:99521450-99522807 (-)
BALB/cJ	ENSMUSG00180052114	lncRNA gene	Chr11:99653725-99655082 (-)
C3H/HeJ	ENSMUSG00175052635	lncRNA gene	Chr11:99579594-99580951 (-)
C57BL/6NJ	ENSMUSG00215054231	lncRNA gene	Chr11:99141610-99142967 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051065	lncRNA gene	Chr11:99080423-99081779 (-)
CBA/J	ENSMUSG00210053528	lncRNA gene	Chr11:99287411-99288768 (-)
DBA/2J	ENSMUSG00185052657	lncRNA gene	Chr11:99629459-99630816 (-)
FVB/NJ	ENSMUSG00205050847	lncRNA gene	Chr11:99472342-99473699 (-)
JF1/MsJ	ENSUMUG00000056534	lncRNA gene	Chr11:99891824-99893180 (-)
LP/J	ENSMUSG00230051106	lncRNA gene	Chr11:100681984-100683341 (-)
NOD/ShiLtJ	ENSMUSG00190052637	lncRNA gene	Chr11:99667975-99669332 (-)
NZO/HlLtJ	ENSMUSG00225053594	lncRNA gene	Chr11:102704616-102705973 (-)
PWK/PhJ	ENSLUMG00010052404	lncRNA gene	Chr11:99425769-99427125 (-)
SPRET/EiJ	ENSMSPG00010051237	lncRNA gene	Chr11:99923402-99924769 (-)
WSB/EiJ	ENSIUOG00005051172	lncRNA gene	Chr11:99423089-99424445 (-)

Homology

• Gene Tree
  Gm57356
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120705 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120705	Ensembl Gene Model | MGI Sequence Detail	1385	C57BL/6J
transcript	ENSMUST00000245323	Ensembl | MGI Sequence Detail	1385	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57356:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr111074	Chr11:102321021-102321090 (-)	51 bp