Gm57352 Gene Detail

Summary

• Symbol
  Gm57352
• Name
  predicted gene, 57352

• Feature Type
  lncRNA gene
• IDs
  MGI:7338617
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:84737833-84764572 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  587 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338617	lncRNA gene	Chr11:84737833-84764572 (+)
129S1/SvImJ	ENSMUSG00200020425	lncRNA gene	Chr11:81906455-81907637 (+)
A/J	ENSMUSG00195009302	lncRNA gene	Chr11:81760986-81762168 (+)
AKR/J	ENSMUSG00220012097	lncRNA gene	Chr11:81970277-81971456 (+)
BALB/cJ	ENSMUSG00180011471	lncRNA gene	Chr11:81952293-81953474 (+)
C3H/HeJ	ENSMUSG00175034497	lncRNA gene	Chr11:81907856-81909038 (+)
C57BL/6NJ	ENSMUSG00215033737	lncRNA gene	Chr11:81535929-81537111 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045428	lncRNA gene	Chr11:81470990-81472174 (+)
CBA/J	ENSMUSG00210039618	lncRNA gene	Chr11:81725509-81726691 (+)
DBA/2J	ENSMUSG00185019997	lncRNA gene	Chr11:82051839-82053018 (+)
FVB/NJ	ENSMUSG00205021925	lncRNA gene	Chr11:81839972-81841153 (+)
JF1/MsJ	ENSUMUG00000028036	lncRNA gene	Chr11:82373137-82374317 (+)
LP/J	ENSMUSG00230029678	lncRNA gene	Chr11:83075588-83076771 (+)
NOD/ShiLtJ	ENSMUSG00190020412	lncRNA gene	Chr11:82052106-82053287 (+)
NZO/HlLtJ	ENSMUSG00225039969	lncRNA gene	Chr11:85180698-85181881 (+)
PWK/PhJ	ENSLUMG00010025656	lncRNA gene	Chr11:81874694-81875875 (+)
SPRET/EiJ	ENSMSPG00010029585	lncRNA gene	Chr11:82342684-82343863 (+)
WSB/EiJ	ENSIUOG00005008053	lncRNA gene	Chr11:81860875-81862056 (+)

Homology

• Gene Tree
  Gm57352
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  35

• Ensembl
  ENSMUSG00000120006 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120006	Ensembl Gene Model | MGI Sequence Detail	26740	C57BL/6J
transcript	ENSMUST00000241004	Ensembl | MGI Sequence Detail	1825	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;