Gm57350 Gene Detail

Summary

• Symbol
  Gm57350
• Name
  predicted gene, 57350

• Feature Type
  lncRNA gene
• IDs
  MGI:7338613
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:119807304-119808079 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338613	lncRNA gene	Chr11:119807304-119808079 (-)
129S1/SvImJ	ENSMUSG00200052345	lncRNA gene	Chr11:117170256-117170962 (-)
A/J	ENSMUSG00195033215	lncRNA gene	Chr11:116845240-116845946 (-)
AKR/J	ENSMUSG00220033417	lncRNA gene	Chr11:116995636-116996342 (-)
BALB/cJ	ENSMUSG00180052465	lncRNA gene	Chr11:117137503-117138209 (-)
C3H/HeJ	ENSMUSG00175047478	lncRNA gene	Chr11:117095014-117095720 (-)
C57BL/6NJ	ENSMUSG00215047244	lncRNA gene	Chr11:116665789-116666495 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035677	lncRNA gene	Chr11:116525012-116525718 (-)
CBA/J	ENSMUSG00210051006	lncRNA gene	Chr11:116809082-116809788 (-)
DBA/2J	ENSMUSG00185027660	lncRNA gene	Chr11:117122227-117122933 (-)
FVB/NJ	ENSMUSG00205046370	lncRNA gene	Chr11:116970894-116971600 (-)
JF1/MsJ	ENSUMUG00000054552	lncRNA gene	Chr11:117421521-117422224 (-)
LP/J	ENSMUSG00230051109	lncRNA gene	Chr11:118188035-118188741 (-)
NOD/ShiLtJ	ENSMUSG00190050291	lncRNA gene	Chr11:117194213-117194919 (-)
NZO/HlLtJ	ENSMUSG00225053983	lncRNA gene	Chr11:120337850-120338556 (-)
PWK/PhJ	ENSLUMG00010024504	lncRNA gene	Chr11:116931609-116932313 (-)
SPRET/EiJ	ENSMSPG00010043840	lncRNA gene	Chr11:117517645-117518344 (-)
WSB/EiJ	ENSIUOG00005048861	lncRNA gene	Chr11:116935944-116936650 (-)

Homology

• Gene Tree
  Gm57350
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000120604 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120604	Ensembl Gene Model | MGI Sequence Detail	776	C57BL/6J
transcript	ENSMUST00000244501	Ensembl | MGI Sequence Detail	717	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57350:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr112240	Chr11:119808007-119808032 (-)	59 bp