Gm57347 Gene Detail

Summary

• Symbol
  Gm57347
• Name
  predicted gene, 57347

• Feature Type
  lncRNA gene
• IDs
  MGI:7338607
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:116324408-116324940 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338607	lncRNA gene	Chr11:116324408-116324940 (-)
129S1/SvImJ	ENSMUSG00200052305	lncRNA gene	Chr11:113685978-113686243 (-)
A/J	ENSMUSG00195031968	lncRNA gene	Chr11:113390364-113390629 (-)
AKR/J	ENSMUSG00220033781	lncRNA gene	Chr11:113494957-113495222 (-)
BALB/cJ	ENSMUSG00180052632	lncRNA gene	Chr11:113686982-113687247 (-)
C3H/HeJ	ENSMUSG00175045860	lncRNA gene	Chr11:113642145-113642410 (-)
C57BL/6NJ	ENSMUSG00215047642	lncRNA gene	Chr11:113184590-113184853 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036486	lncRNA gene	Chr11:113044973-113045236 (-)
CBA/J	ENSMUSG00210051017	lncRNA gene	Chr11:113362124-113362389 (-)
DBA/2J	ENSMUSG00185027872	lncRNA gene	Chr11:113678457-113678722 (-)
FVB/NJ	ENSMUSG00205045530	lncRNA gene	Chr11:113486179-113486442 (-)
JF1/MsJ	ENSUMUG00000053738	lncRNA gene	Chr11:113946378-113946643 (-)
LP/J	ENSMUSG00230051306	lncRNA gene	Chr11:114735434-114735699 (-)
NOD/ShiLtJ	ENSMUSG00190050130	lncRNA gene	Chr11:113709569-113709834 (-)
NZO/HlLtJ	ENSMUSG00225053429	lncRNA gene	Chr11:116787931-116788196 (-)
PWK/PhJ	ENSLUMG00010025206	lncRNA gene	Chr11:113462697-113462962 (-)
SPRET/EiJ	ENSMSPG00010045023	lncRNA gene	Chr11:113982107-113982376 (-)
WSB/EiJ	ENSIUOG00005049097	lncRNA gene	Chr11:113450707-113450972 (-)

Homology

• Gene Tree
  Gm57347
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120505 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120505	Ensembl Gene Model | MGI Sequence Detail	533	C57BL/6J
transcript	ENSMUST00000243828	Ensembl | MGI Sequence Detail	533	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57347:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr111922	Chr11:116324618-116324648 (-)	307 bp