Gm57324 Gene Detail

Summary

• Symbol
  Gm57324
• Name
  predicted gene, 57324

• Feature Type
  lncRNA gene
• IDs
  MGI:7338561
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:88857948-88868692 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  464 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338561	lncRNA gene	Chr5:88857948-88868692 (-)
129S1/SvImJ	ENSMUSG00200010236	lncRNA gene	Chr5:84596633-84597360 (-)
A/J	ENSMUSG00195026296	lncRNA gene	Chr5:83769424-83770151 (-)
AKR/J	ENSMUSG00220012369	lncRNA gene	Chr5:83912706-83913433 (-)
BALB/cJ	ENSMUSG00180025463	lncRNA gene	Chr5:83596380-83597107 (-)
C3H/HeJ	ENSMUSG00175044580	lncRNA gene	Chr5:85688182-85688909 (-)
C57BL/6NJ	ENSMUSG00215030532	lncRNA gene	Chr5:84462460-84463187 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038211	lncRNA gene	Chr5:83397822-83398546 (-)
CBA/J	ENSMUSG00210006230	lncRNA gene	Chr5:84491595-84492322 (-)
DBA/2J	ENSMUSG00185041583	lncRNA gene	Chr5:86406007-86406734 (-)
FVB/NJ	ENSMUSG00205034644	lncRNA gene	Chr5:83304791-83305518 (-)
JF1/MsJ	ENSUMUG00000001004	lncRNA gene	Chr5:90763022-90763745 (-)
LP/J	ENSMUSG00230028043	lncRNA gene	Chr5:91123135-91123862 (-)
NOD/ShiLtJ	ENSMUSG00190041195	lncRNA gene	Chr5:83359908-83360635 (-)
NZO/HlLtJ	ENSMUSG00225009453	lncRNA gene	Chr5:96264013-96264738 (-)
PWK/PhJ	ENSLUMG00010029116	lncRNA gene	Chr5:83423943-83424665 (-)
SPRET/EiJ	ENSMSPG00010038518	lncRNA gene	Chr5:85836076-85836785 (-)
WSB/EiJ	ENSIUOG00005029955	lncRNA gene	Chr5:86388510-86389237 (-)

Homology

• Gene Tree
  Gm57324
  

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000121172 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121172	Ensembl Gene Model | MGI Sequence Detail	10745	C57BL/6J
transcript	ENSMUST00000247378	Ensembl | MGI Sequence Detail	1934	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57324:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr51697	Chr5:88868628-88868641 (-)	57 bp