Gm57303 Gene Detail

Summary

• Symbol
  Gm57303
• Name
  predicted gene, 57303

• Feature Type
  lncRNA gene
• IDs
  MGI:7338519
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:143024787-143026121 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338519	lncRNA gene	Chr5:143024787-143026121 (+)
129S1/SvImJ	ENSMUSG00200041764	lncRNA gene	Chr5:136889835-136890606 (+)
A/J	ENSMUSG00195046921	lncRNA gene	Chr5:136537369-136538140 (+)
AKR/J	ENSMUSG00220023454	lncRNA gene	Chr5:135767232-135768003 (+)
BALB/cJ	ENSMUSG00180035648	lncRNA gene	Chr5:136639436-136640207 (+)
C3H/HeJ	ENSMUSG00175050229	lncRNA gene	Chr5:138564954-138565725 (+)
C57BL/6NJ	ENSMUSG00215042314	lncRNA gene	Chr5:136473573-136474344 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036722	lncRNA gene	Chr5:135912813-135913652 (+)
CBA/J	ENSMUSG00210024060	lncRNA gene	Chr5:137361726-137362497 (+)
DBA/2J	ENSMUSG00185055263	lncRNA gene	Chr5:140366561-140367332 (+)
FVB/NJ	ENSMUSG00205044474	lncRNA gene	Chr5:136190978-136191749 (+)
JF1/MsJ	ENSUMUG00000050022	lncRNA gene	Chr5:143239307-143240150 (+)
LP/J	ENSMUSG00230030416	lncRNA gene	Chr5:144493589-144494360 (+)
NOD/ShiLtJ	ENSMUSG00190045599	lncRNA gene	Chr5:136329929-136330700 (+)
NZO/HlLtJ	ENSMUSG00225024069	lncRNA gene	Chr5:151964189-151964960 (+)
PWK/PhJ	ENSLUMG00010021110	lncRNA gene	Chr5:134952380-134953222 (+)
SPRET/EiJ	ENSMSPG00010039491	lncRNA gene	Chr5:138564665-138565507 (+)
WSB/EiJ	ENSIUOG00005040767	lncRNA gene	Chr5:138852751-138853522 (+)

Homology

• Gene Tree
  Gm57303
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000121007 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121007	Ensembl Gene Model | MGI Sequence Detail	1335	C57BL/6J
transcript	ENSMUST00000246845	Ensembl | MGI Sequence Detail	772	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57303:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49636	Chr5:143024758-143024819 (+)	2 bp