Gm57286 Gene Detail

Summary

• Symbol
  Gm57286
• Name
  predicted gene, 57286

• Feature Type
  lncRNA gene
• IDs
  MGI:7338485
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:23621527-23623592 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338485	lncRNA gene	Chr5:23621527-23623592 (-)
129S1/SvImJ	ENSMUSG00200011901	lncRNA gene	Chr5:19244089-19246099 (-)
A/J	ENSMUSG00195041353	lncRNA gene	Chr5:18698812-18700820 (-)
AKR/J	ENSMUSG00220037721	lncRNA gene	Chr5:18793489-18795499 (-)
BALB/cJ	ENSMUSG00180025338	lncRNA gene	Chr5:18577027-18579037 (-)
C3H/HeJ	ENSMUSG00175027674	lncRNA gene	Chr5:20497046-20499054 (-)
C57BL/6NJ	ENSMUSG00215030019	lncRNA gene	Chr5:19132669-19134677 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003515	lncRNA gene	Chr5:18718412-18720419 (-)
CBA/J	ENSMUSG00210005489	lncRNA gene	Chr5:19536623-19538631 (-)
DBA/2J	ENSMUSG00185038459	lncRNA gene	Chr5:21087496-21089506 (-)
FVB/NJ	ENSMUSG00205036997	lncRNA gene	Chr5:18310460-18312470 (-)
JF1/MsJ	ENSUMUG00000006839	lncRNA gene	Chr5:25631949-25633957 (-)
LP/J	ENSMUSG00230026413	lncRNA gene	Chr5:25526289-25528299 (-)
NOD/ShiLtJ	ENSMUSG00190005304	lncRNA gene	Chr5:18615060-18617070 (-)
NZO/HlLtJ	ENSMUSG00225021916	lncRNA gene	Chr5:30923925-30925935 (-)
PWK/PhJ	ENSLUMG00010036164	lncRNA gene	Chr5:18687956-18689963 (-)
SPRET/EiJ	ENSMSPG00010031721	lncRNA gene	Chr5:19551292-19553313 (-)
WSB/EiJ	ENSIUOG00005044068	lncRNA gene	Chr5:21429712-21431722 (-)

Homology

• Gene Tree
  Gm57286
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm57286
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000119996 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119996	Ensembl Gene Model | MGI Sequence Detail	2066	C57BL/6J
transcript	ENSMUST00000240965	Ensembl | MGI Sequence Detail	2066	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4

TSS for Gm57286:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr50265	Chr5:23623512-23623555 (-)	58 bp