Gm57284 Gene Detail

Summary

• Symbol
  Gm57284
• Name
  predicted gene, 57284

• Feature Type
  lncRNA gene
• IDs
  MGI:7338481
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:29335024-29400943 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1572 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338481	lncRNA gene	Chr5:29335024-29400943 (-)
129S1/SvImJ	ENSMUSG00200014271	lncRNA gene	Chr5:24875927-24877749 (-)
A/J	ENSMUSG00195050145	lncRNA gene	Chr5:24337949-24339771 (-)
AKR/J	ENSMUSG00220008991	lncRNA gene	Chr5:24341786-24343608 (-)
BALB/cJ	ENSMUSG00180037632	lncRNA gene	Chr5:24142575-24144397 (-)
C3H/HeJ	ENSMUSG00175050448	lncRNA gene	Chr5:26117023-26118845 (-)
C57BL/6NJ	ENSMUSG00215042105	lncRNA gene	Chr5:24861344-24863166 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025688	lncRNA gene	Chr5:24311660-24313483 (-)
CBA/J	ENSMUSG00210049431	lncRNA gene	Chr5:25090257-25092079 (-)
DBA/2J	ENSMUSG00185040470	lncRNA gene	Chr5:26952708-26954530 (-)
FVB/NJ	ENSMUSG00205041183	lncRNA gene	Chr5:23850426-23852248 (-)
JF1/MsJ	ENSUMUG00000053087	lncRNA gene	Chr5:31483098-31484920 (-)
LP/J	ENSMUSG00230048421	lncRNA gene	Chr5:31560508-31562330 (-)
NOD/ShiLtJ	ENSMUSG00190016060	lncRNA gene	Chr5:24149796-24151618 (-)
NZO/HlLtJ	ENSMUSG00225021704	lncRNA gene	Chr5:36777367-36779189 (-)
PWK/PhJ	ENSLUMG00010049882	lncRNA gene	Chr5:24247312-24249137 (-)
SPRET/EiJ	ENSMSPG00010043926	lncRNA gene	Chr5:25400295-25402115 (-)
WSB/EiJ	ENSIUOG00005044623	lncRNA gene	Chr5:27034762-27036584 (-)

Homology

• Gene Tree
  Gm57284
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000119967 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119967	Ensembl Gene Model | MGI Sequence Detail	65920	C57BL/6J
transcript	ENSMUST00000240872	Ensembl | MGI Sequence Detail	1927	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57284:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr50458	Chr5:29400793-29400825 (-)	134 bp