Gm57277 Gene Detail

Summary

• Symbol
  Gm57277
• Name
  predicted gene, 57277

• Feature Type
  lncRNA gene
• IDs
  MGI:7338467
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:66060763-66073081 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  463 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338467	lncRNA gene	Chr5:66060763-66073081 (+)
129S1/SvImJ	ENSMUSG00200035939	lncRNA gene	Chr5:61686295-61687020 (+)
A/J	ENSMUSG00195034482	lncRNA gene	Chr5:61063547-61064271 (+)
AKR/J	ENSMUSG00220004466	lncRNA gene	Chr5:61197777-61198500 (+)
BALB/cJ	ENSMUSG00180006186	lncRNA gene	Chr5:60849400-60850124 (+)
C3H/HeJ	ENSMUSG00175028365	lncRNA gene	Chr5:62883423-62884147 (+)
C57BL/6NJ	ENSMUSG00215006179	lncRNA gene	Chr5:61615178-61615904 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031592	lncRNA gene	Chr5:60765770-60766503 (+)
CBA/J	ENSMUSG00210023845	lncRNA gene	Chr5:61796361-61797085 (+)
DBA/2J	ENSMUSG00185005637	lncRNA gene	Chr5:63653853-63654577 (+)
FVB/NJ	ENSMUSG00205011600	lncRNA gene	Chr5:60597523-60598247 (+)
JF1/MsJ	ENSUMUG00000020894	lncRNA gene	Chr5:68127956-68128679 (+)
LP/J	ENSMUSG00230009596	lncRNA gene	Chr5:68299000-68299725 (+)
NOD/ShiLtJ	ENSMUSG00190004370	lncRNA gene	Chr5:60788532-60789255 (+)
NZO/HlLtJ	ENSMUSG00225011004	lncRNA gene	Chr5:73424732-73425455 (+)
PWK/PhJ	ENSLUMG00010015053	lncRNA gene	Chr5:60730589-60731313 (+)
SPRET/EiJ	ENSMSPG00010037743	lncRNA gene	Chr5:62544363-62545093 (+)
WSB/EiJ	ENSIUOG00005018849	lncRNA gene	Chr5:63741439-63742163 (+)

Homology

• Gene Tree
  Gm57277
  

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00000120641 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120641	Ensembl Gene Model | MGI Sequence Detail	12319	C57BL/6J
transcript	ENSMUST00000342107	Ensembl | MGI Sequence Detail	1562	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;