Gm57265 Gene Detail

Summary

• Symbol
  Gm57265
• Name
  predicted gene, 57265

• Feature Type
  lncRNA gene
• IDs
  MGI:7338443
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr5:122533868-122535131 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338443	lncRNA gene	Chr5:122533868-122535131 (-)
129S1/SvImJ	ENSMUSG00200029805	lncRNA gene	Chr5:116260333-116260965 (-)
A/J	ENSMUSG00195012525	lncRNA gene	Chr5:115781673-115782305 (-)
AKR/J	ENSMUSG00220048495	lncRNA gene	Chr5:115295944-115296576 (-)
BALB/cJ	ENSMUSG00180040714	lncRNA gene	Chr5:115896208-115896840 (-)
C3H/HeJ	ENSMUSG00175033008	lncRNA gene	Chr5:117915858-117916490 (-)
C57BL/6NJ	ENSMUSG00215043734	lncRNA gene	Chr5:115941672-115942304 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041639	lncRNA gene	Chr5:115190374-115191005 (-)
CBA/J	ENSMUSG00210010498	lncRNA gene	Chr5:116666685-116667317 (-)
DBA/2J	ENSMUSG00185055580	lncRNA gene	Chr5:119717899-119718531 (-)
FVB/NJ	ENSMUSG00205044896	lncRNA gene	Chr5:115571505-115572137 (-)
JF1/MsJ	ENSUMUG00000050909	lncRNA gene	Chr5:122559279-122559915 (-)
LP/J	ENSMUSG00230047971	lncRNA gene	Chr5:123782376-123783008 (-)
NOD/ShiLtJ	ENSMUSG00190047860	lncRNA gene	Chr5:115593216-115593847 (-)
NZO/HlLtJ	ENSMUSG00225017154	lncRNA gene	Chr5:131474721-131475353 (-)
PWK/PhJ	ENSLUMG00010042993	lncRNA gene	Chr5:114468143-114468811 (-)
SPRET/EiJ	ENSMSPG00010045279	lncRNA gene	Chr5:117779912-117780356 (-)
WSB/EiJ	ENSIUOG00005020699	lncRNA gene	Chr5:118282097-118282729 (-)

Homology

• Gene Tree
  Gm57265
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120495 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120495	Ensembl Gene Model | MGI Sequence Detail	1264	C57BL/6J
transcript	ENSMUST00000243714	Ensembl | MGI Sequence Detail	685	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57265:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr53101	Chr5:122535076-122535088 (-)	49 bp
Tssr53100	Chr5:122534953-122534966 (-)	171 bp