Gm57264 Gene Detail

Summary

• Symbol
  Gm57264
• Name
  predicted gene, 57264

• Feature Type
  lncRNA gene
• IDs
  MGI:7338441
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:108516459-108517423 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338441	lncRNA gene	Chr5:108516459-108517423 (-)
129S1/SvImJ	ENSMUSG00200024305	lncRNA gene	Chr5:102266614-102266935 (-)
A/J	ENSMUSG00195041995	lncRNA gene	Chr5:101723433-101723754 (-)
AKR/J	ENSMUSG00220051817	lncRNA gene	Chr5:101273194-101273515 (-)
BALB/cJ	ENSMUSG00180037166	lncRNA gene	Chr5:101876263-101876584 (-)
C3H/HeJ	ENSMUSG00175047865	lncRNA gene	Chr5:103917885-103918206 (-)
C57BL/6NJ	ENSMUSG00215038525	lncRNA gene	Chr5:101919924-101920245 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031884	lncRNA gene	Chr5:101160719-101161040 (-)
CBA/J	ENSMUSG00210045336	lncRNA gene	Chr5:102675456-102675777 (-)
DBA/2J	ENSMUSG00185048644	lncRNA gene	Chr5:105579648-105579969 (-)
FVB/NJ	ENSMUSG00205041181	lncRNA gene	Chr5:101602080-101602401 (-)
JF1/MsJ	ENSUMUG00000016372	lncRNA gene	Chr5:108641021-108641342 (-)
LP/J	ENSMUSG00230032396	lncRNA gene	Chr5:109807670-109807991 (-)
NOD/ShiLtJ	ENSMUSG00190051506	lncRNA gene	Chr5:101575834-101576155 (-)
NZO/HlLtJ	ENSMUSG00225026464	lncRNA gene	Chr5:117429518-117429839 (-)
PWK/PhJ	ENSLUMG00010016758	lncRNA gene	Chr5:100627108-100627429 (-)
SPRET/EiJ	ENSMSPG00010047547	lncRNA gene	Chr5:103731832-103732159 (-)
WSB/EiJ	ENSIUOG00005043841	lncRNA gene	Chr5:104304918-104305239 (-)

Homology

• Gene Tree
  Gm57264
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120483 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120483	Ensembl Gene Model | MGI Sequence Detail	965	C57BL/6J
transcript	ENSMUST00000243618	Ensembl | MGI Sequence Detail	965	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57264:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr52415	Chr5:108517272-108517297 (-)	138 bp