Gm57263 Gene Detail

Summary

• Symbol
  Gm57263
• Name
  predicted gene, 57263

• Feature Type
  lncRNA gene
• IDs
  MGI:7338439
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:117256672-117258108 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338439	lncRNA gene	Chr5:117256672-117258108 (-)
129S1/SvImJ	ENSMUSG00200023838	lncRNA gene	Chr5:111012516-111013152 (-)
A/J	ENSMUSG00195042954	lncRNA gene	Chr5:110526080-110526716 (-)
AKR/J	ENSMUSG00220052610	lncRNA gene	Chr5:110026841-110027481 (-)
BALB/cJ	ENSMUSG00180049024	lncRNA gene	Chr5:110647847-110648479 (-)
C3H/HeJ	ENSMUSG00175033458	lncRNA gene	Chr5:112637594-112638230 (-)
C57BL/6NJ	ENSMUSG00215037953	lncRNA gene	Chr5:110660233-110660869 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035486	lncRNA gene	Chr5:109837384-109838064 (-)
CBA/J	ENSMUSG00210046070	lncRNA gene	Chr5:111388660-111389300 (-)
DBA/2J	ENSMUSG00185055505	lncRNA gene	Chr5:114457811-114458443 (-)
FVB/NJ	ENSMUSG00205052533	lncRNA gene	Chr5:110295951-110296591 (-)
JF1/MsJ	ENSUMUG00000055449	lncRNA gene	Chr5:117284449-117285034 (-)
LP/J	ENSMUSG00230049577	lncRNA gene	Chr5:118535049-118535685 (-)
NOD/ShiLtJ	ENSMUSG00190049560	lncRNA gene	Chr5:110328786-110329426 (-)
NZO/HlLtJ	ENSMUSG00225016188	lncRNA gene	Chr5:126207153-126207785 (-)
PWK/PhJ	ENSLUMG00010042730	lncRNA gene	Chr5:109170511-109171130 (-)
SPRET/EiJ	ENSMSPG00010046093	lncRNA gene	Chr5:112467918-112468490 (-)
WSB/EiJ	ENSIUOG00005020048	lncRNA gene	Chr5:113023469-113024109 (-)

Homology

• Gene Tree
  Gm57263
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120368 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120368	Ensembl Gene Model | MGI Sequence Detail	1437	C57BL/6J
transcript	ENSMUST00000242821	Ensembl | MGI Sequence Detail	1437	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57263:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr52880	Chr5:117257941-117257962 (-)	156 bp