Gm57256 Gene Detail

Summary

• Symbol
  Gm57256
• Name
  predicted gene, 57256

• Feature Type
  lncRNA gene
• IDs
  MGI:7338425
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:105798883-105810373 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  543 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338425	lncRNA gene	Chr5:105798883-105810373 (+)
129S1/SvImJ	ENSMUSG00200006302	lncRNA gene	Chr5:99531325-99532428 (+)
A/J	ENSMUSG00195037499	lncRNA gene	Chr5:98988037-98989138 (+)
AKR/J	ENSMUSG00220038388	lncRNA gene	Chr5:98549823-98550926 (+)
BALB/cJ	ENSMUSG00180035722	lncRNA gene	Chr5:99140173-99141273 (+)
C3H/HeJ	ENSMUSG00175036172	lncRNA gene	Chr5:101174452-101175552 (+)
C57BL/6NJ	ENSMUSG00215019430	lncRNA gene	Chr5:99200885-99201988 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024216	lncRNA gene	Chr5:98422743-98423844 (+)
CBA/J	ENSMUSG00210034289	lncRNA gene	Chr5:99932220-99933320 (+)
DBA/2J	ENSMUSG00185049674	lncRNA gene	Chr5:102864662-102865786 (+)
FVB/NJ	ENSMUSG00205041810	lncRNA gene	Chr5:98841718-98842819 (+)
JF1/MsJ	ENSUMUG00000019737	lncRNA gene	Chr5:105885055-105886148 (+)
LP/J	ENSMUSG00230031776	lncRNA gene	Chr5:107072637-107073739 (+)
NOD/ShiLtJ	ENSMUSG00190028850	lncRNA gene	Chr5:98865671-98866773 (+)
NZO/HlLtJ	ENSMUSG00225026268	lncRNA gene	Chr5:114694326-114695428 (+)
PWK/PhJ	ENSLUMG00010015956	lncRNA gene	Chr5:97897793-97898888 (+)
SPRET/EiJ	ENSMSPG00010046815	lncRNA gene	Chr5:100972557-100973646 (+)
WSB/EiJ	ENSIUOG00005032658	lncRNA gene	Chr5:101580249-101581349 (+)

Homology

• Gene Tree
  Gm57256
  

Sequences &
Gene Models

• All Sequences
  35

• Ensembl
  ENSMUSG00000120245 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120245	Ensembl Gene Model | MGI Sequence Detail	11491	C57BL/6J
transcript	ENSMUST00000341892	Ensembl | MGI Sequence Detail	1293	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;