Gm57252 Gene Detail

Summary

• Symbol
  Gm57252
• Name
  predicted gene, 57252

• Feature Type
  lncRNA gene
• IDs
  MGI:7338417
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:99027967-99031543 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338417	lncRNA gene	Chr7:99027967-99031543 (-)
129S1/SvImJ	ENSMUSG00200050232	lncRNA gene	Chr7:85850715-85852118 (-)
A/J	ENSMUSG00195041062	lncRNA gene	Chr7:90355756-90357159 (-)
AKR/J	ENSMUSG00220051161	lncRNA gene	Chr7:83772611-83774014 (-)
BALB/cJ	ENSMUSG00180035432	lncRNA gene	Chr7:87029130-87030533 (-)
C3H/HeJ	ENSMUSG00175024761	lncRNA gene	Chr7:87678160-87679559 (-)
C57BL/6NJ	ENSMUSG00215035837	lncRNA gene	Chr7:86873871-86875274 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033207	lncRNA gene	Chr7:90269141-90270545 (-)
CBA/J	ENSMUSG00210025640	lncRNA gene	Chr7:87531920-87533319 (-)
DBA/2J	ENSMUSG00185057093	lncRNA gene	Chr7:91852898-91854297 (-)
FVB/NJ	ENSMUSG00205037718	lncRNA gene	Chr7:87527311-87528714 (-)
JF1/MsJ	ENSUMUG00000050235	lncRNA gene	Chr7:96758819-96760223 (-)
LP/J	ENSMUSG00230044707	lncRNA gene	Chr7:97976100-97977503 (-)
NOD/ShiLtJ	ENSMUSG00190021822	lncRNA gene	Chr7:87801660-87803063 (-)
NZO/HlLtJ	ENSMUSG00225050949	lncRNA gene	Chr7:96167348-96168751 (-)
PWK/PhJ	ENSLUMG00010049824	lncRNA gene	Chr7:85990201-85991600 (-)
SPRET/EiJ	ENSMSPG00010012910	lncRNA gene	Chr7:87229483-87230896 (-)
WSB/EiJ	ENSIUOG00005011094	lncRNA gene	Chr7:88147865-88149269 (-)

Homology

• Gene Tree
  Gm57252
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121235 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121235	Ensembl Gene Model | MGI Sequence Detail	3577	C57BL/6J
transcript	ENSMUST00000247544	Ensembl | MGI Sequence Detail	3577	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57252:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr73684	Chr7:99031527-99031547 (-)	6 bp
Tssr73683	Chr7:99031504-99031520 (-)	31 bp