Gm57226 Gene Detail

Summary

• Symbol
  Gm57226
• Name
  predicted gene, 57226

• Feature Type
  lncRNA gene
• IDs
  MGI:7338365
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:65021051-65024147 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338365	lncRNA gene	Chr7:65021051-65024147 (+)
129S1/SvImJ	ENSMUSG00200012210	lncRNA gene	Chr7:51730530-51733461 (+)
A/J	ENSMUSG00195013828	lncRNA gene	Chr7:56158874-56161806 (+)
AKR/J	ENSMUSG00220011571	lncRNA gene	Chr7:49660959-49663892 (+)
BALB/cJ	ENSMUSG00180005111	lncRNA gene	Chr7:52870988-52873921 (+)
C3H/HeJ	ENSMUSG00175011699	lncRNA gene	Chr7:53662781-53665713 (+)
C57BL/6NJ	ENSMUSG00215019839	lncRNA gene	Chr7:52797209-52800142 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012302	lncRNA gene	Chr7:56336146-56339103 (+)
CBA/J	ENSMUSG00210019947	lncRNA gene	Chr7:53501291-53504222 (+)
DBA/2J	ENSMUSG00185006333	lncRNA gene	Chr7:57831474-57834421 (+)
FVB/NJ	ENSMUSG00205004483	lncRNA gene	Chr7:53503313-53506244 (+)
JF1/MsJ	ENSUMUG00000012825	lncRNA gene	Chr7:62577628-62580573 (+)
LP/J	ENSMUSG00230021202	lncRNA gene	Chr7:63925009-63927939 (+)
NOD/ShiLtJ	ENSMUSG00190007347	lncRNA gene	Chr7:53609565-53612495 (+)
NZO/HlLtJ	ENSMUSG00225016881	lncRNA gene	Chr7:62209202-62212132 (+)
PWK/PhJ	ENSLUMG00010018815	lncRNA gene	Chr7:52124904-52127821 (+)
SPRET/EiJ	ENSMSPG00010003701	lncRNA gene	Chr7:52491801-52494716 (+)
WSB/EiJ	ENSIUOG00005005207	lncRNA gene	Chr7:54048083-54051000 (+)

Homology

• Gene Tree
  Gm57226
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000121090 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121090	Ensembl Gene Model | MGI Sequence Detail	3097	C57BL/6J
transcript	ENSMUST00000247101	Ensembl | MGI Sequence Detail	1372	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm57226:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67032	Chr7:65021170-65021181 (+)	125 bp