Gm57225 Gene Detail

Summary

• Symbol
  Gm57225
• Name
  predicted gene, 57225

• Feature Type
  lncRNA gene
• IDs
  MGI:7338363
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:19013102-19014244 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338363	lncRNA gene	Chr7:19013102-19014244 (+)
129S1/SvImJ	ENSMUSG00200046253	lncRNA gene	Chr7:12206258-12207386 (+)
A/J	ENSMUSG00195054108	lncRNA gene	Chr7:12649568-12650702 (+)
AKR/J	ENSMUSG00220028288	lncRNA gene	Chr7:10982296-10983430 (+)
BALB/cJ	ENSMUSG00180053783	lncRNA gene	Chr7:12505898-12507032 (+)
C3H/HeJ	ENSMUSG00175053037	lncRNA gene	Chr7:13088849-13089977 (+)
C57BL/6NJ	ENSMUSG00215055014	lncRNA gene	Chr7:11196441-11197575 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052457	lncRNA gene	Chr7:13114326-13115456 (+)
CBA/J	ENSMUSG00210053638	lncRNA gene	Chr7:12315537-12316665 (+)
DBA/2J	ENSMUSG00185055911	lncRNA gene	Chr7:15758703-15759837 (+)
FVB/NJ	ENSMUSG00205051507	lncRNA gene	Chr7:12701630-12702764 (+)
JF1/MsJ	ENSUMUG00000042457	lncRNA gene	Chr7:19074142-19075269 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190052634	lncRNA gene	Chr7:8971725-8972853 (+)
NZO/HlLtJ	ENSMUSG00225054164	lncRNA gene	Chr7:17345319-17346453 (+)
PWK/PhJ	ENSLUMG00010051546	lncRNA gene	Chr7:1920837-1921965 (+)
SPRET/EiJ	ENSMSPG00010051573	lncRNA gene	Chr7:12048292-12049406 (+)
WSB/EiJ	ENSIUOG00005053597	lncRNA gene	Chr7:19560645-19561779 (-)

Homology

• Gene Tree
  Gm57225
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000120737 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120737	Ensembl Gene Model | MGI Sequence Detail	1143	C57BL/6J
transcript	ENSMUST00000245477	Ensembl | MGI Sequence Detail	1143	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57225:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64815	Chr7:19013111-19013135 (+)	21 bp