Gm57215 Gene Detail

Summary

• Symbol
  Gm57215
• Name
  predicted gene, 57215

• Feature Type
  lncRNA gene
• IDs
  MGI:7338343
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:144494462-144496309 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338343	lncRNA gene	Chr7:144494462-144496309 (-)
129S1/SvImJ	ENSMUSG00200046871	lncRNA gene	Chr7:131059000-131059849 (-)
A/J	ENSMUSG00195001781	lncRNA gene	Chr7:135542619-135543468 (-)
AKR/J	ENSMUSG00220037040	lncRNA gene	Chr7:129019761-129020608 (-)
BALB/cJ	ENSMUSG00180000897	lncRNA gene	Chr7:132232600-132233446 (-)
C3H/HeJ	ENSMUSG00175004078	lncRNA gene	Chr7:132963644-132964492 (-)
C57BL/6NJ	ENSMUSG00215000130	lncRNA gene	Chr7:132229889-132230740 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002955	lncRNA gene	Chr7:135558708-135559557 (-)
CBA/J	ENSMUSG00210003848	lncRNA gene	Chr7:132721135-132721983 (-)
DBA/2J	ENSMUSG00185018384	lncRNA gene	Chr7:136999957-137000806 (-)
FVB/NJ	ENSMUSG00205002181	lncRNA gene	Chr7:132627881-132628729 (-)
JF1/MsJ	ENSUMUG00000002089	lncRNA gene	Chr7:142028319-142029170 (-)
LP/J	ENSMUSG00230007910	lncRNA gene	Chr7:143161426-143162274 (-)
NOD/ShiLtJ	ENSMUSG00190003977	lncRNA gene	Chr7:132828662-132829510 (-)
NZO/HlLtJ	ENSMUSG00225021229	lncRNA gene	Chr7:141371996-141372844 (-)
PWK/PhJ	ENSLUMG00010048221	lncRNA gene	Chr7:131197903-131198748 (-)
SPRET/EiJ	ENSMSPG00010001010	lncRNA gene	Chr7:132763881-132764727 (-)
WSB/EiJ	ENSIUOG00005000951	lncRNA gene	Chr7:133624400-133625249 (-)

Homology

• Gene Tree
  Gm57215
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120825 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120825	Ensembl Gene Model | MGI Sequence Detail	1848	C57BL/6J
transcript	ENSMUST00000245982	Ensembl | MGI Sequence Detail	1848	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57215:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr76014	Chr7:144495264-144495281 (-)	1,036 bp
Tssr76013	Chr7:144495217-144495230 (-)	1,085 bp